Carassius gibelio (silver crucian carp): 127986624
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Entry
127986624 CDS
T08819
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127986624
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127986624
09144 Cellular community - eukaryotes
04510 Focal adhesion
127986624
09142 Cell motility
04820 Cytoskeleton in muscle cells
127986624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127986624
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127986624
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127986624
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Opsonins
127986624
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127986624
Exosomal proteins of colorectal cancer cells
127986624
Exosomal proteins of bladder cancer cells
127986624
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127986624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
EGF_MSP1_1
Prominin
Motif
Other DBs
NCBI-GeneID:
127986624
NCBI-ProteinID:
XP_052444895
LinkDB
All DBs
Position
B21:complement(25176001..25185130)
Genome browser
AA seq
950 aa
AA seq
DB search
MTGMMHLLAAVSLILTFSSASAETTVYNLLTSPDCLPDLLHGGLAEQGVTELFILTTFRL
QPQTGNTIFSLFNPQDNRKYFEFSVLGKLNKATLRYQRRDGRMSTVTFSNLKLADGEKHR
LLFHLKGLEVDKPGGFPQNQGVLPVPGVELHLDCRLVETLRDLPAVFNGLNNQQGVELKT
MQGKAQEGLEELKLAYGDSMENVASLQDCHTHQSDSVQTLGLNTKQLTNQMLELTKVINE
LKDVLIQQVKETSFLRNTISECQACGLGGTEVVKPKCTPGVCFRDDMCIETAEGVECGPC
PDGYTGDGYSCDDVDECQFNPCFPGVRCVNMAPGFRCEACPLGFTGKPLEGVGVAYAQTH
KQVCDDIDECKGPDNGGCTPNSICVNSVGSYQCGRCKNGFTGDQIRGCKPEKSCGNRLQN
PCDPNAQCIEEKDGTITCQCGIGWAGNGYLCGKDTDIDGYPDEKLRCRDPTCRKDNCVTV
PNSGQEDADDDGKGDACDPDADGDGIPNEQDNCWLTPNINQLNTDKDSHGNACDNCIRVD
NPDQRDTDSDGLGDACDDDMDGDGLKNFLDNCQRVKNRDQLDRDGDGVGDACDSCPDIPN
PNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPLVINSSQLDTDKDGLGDECDDDDDND
GIPDLLPPGPDNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEITLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSNTGPGEHLR
NSLWHTGDTNDQVRLLWKDPRNVGWKDRVSYRWYLQHRPQVGYIRVRFYEGSELVADSGV
TIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTKNDMDPL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcatgatgcatctccttgcggccgtttctctaatcttgactttcagctcagca
agcgcagaaacaaccgtgtataacctcttaacgtcaccggactgtctaccggatctactg
cacggaggcttggcagagcagggagtaacagaactctttattctcacaacgttccgtctc
cagcctcaaaccggaaacaccatattcagcctgttcaatccgcaagacaacagaaagtac
tttgagttttctgtgcttgggaaactcaataaagctactttacgataccagcgcagagat
ggtaggatgagtaccgtcaccttcagtaacctgaaactggctgatggtgagaagcatcgg
ctgctcttccatctgaaggggctggaggtggacaaaccagggggcttcccgcaaaaccag
ggggtgttaccggtgcccggggtggagctccacctggactgcaggctggtggagacgctg
agagatttaccagctgtgtttaatggcctaaacaatcaacagggagtggagctcaaaact
atgcaggggaaagcacaagaggggttggaggaactcaaactggcatatggtgattcaatg
gaaaatgttgcatctctccaggactgccacactcatcagagcgactcggtacagacttta
gggcttaatacgaaacagcttacaaatcagatgctggagctgacaaaggtcattaatgag
cttaaagatgtgcttattcagcaggtgaaggaaacatcttttctcagaaacaccatctct
gaatgccaggcttgtgggctgggtggaacggaggtggtgaaaccaaagtgcactcctgga
gtgtgtttccgtgatgacatgtgtatagaaacagctgagggagtggagtgcggtccatgc
cctgatggatacactggagatggatacagctgtgatgacgttgatgagtgccagtttaat
ccctgcttccctggcgtgaggtgtgtgaacatggctccaggtttccgctgtgaggcatgt
cctcttggattcactggcaaaccactggagggtgttggagtggcgtatgcacagacacac
aagcaggtgtgtgatgatattgatgagtgtaaaggaccagataatggaggatgcacccct
aactccatctgtgtgaattctgtgggatcatatcaatgtggccgatgtaagaacggattc
acaggtgaccagattagaggttgtaagccagaaaaaagctgcggaaaccgcctacagaac
ccttgcgaccccaatgcgcagtgcatagaggaaaaagatggcactatcacatgccagtgt
ggcattggatgggcaggaaatggttatctctgcggtaaagacactgacatcgacgggtac
cctgatgagaagctgcgctgcagagacccaacctgcagaaaggataactgtgtaacagtc
ccaaactcgggacaagaggacgcagatgacgacgggaaaggcgatgcatgtgacccagat
gcagatggagatggaataccgaatgagcaggataactgctggctgacgccaaatataaac
caactgaacactgataaggacagccatggcaatgcatgtgacaactgtatccgagtggat
aacccagaccagagagacacagattctgatggcctcggagatgcatgtgatgacgacatg
gatggagatgggttgaaaaacttcctggataactgccagcgtgtgaaaaatcgtgaccag
ctggatcgtgatggggatggggtgggagatgcatgtgatagctgtcctgacatcccaaat
ccaaatcagtctgacatagacaatgatcttgtcggagattcttgcgacacaaatcaagat
agcgatggtgatggtcaccaagatagcaaagacaactgcccactggtaataaacagctcc
cagctggacacagataaagacggactgggagatgaatgtgacgatgatgatgataatgac
ggtattcccgacttactgcctcctgggccagataactgccggttggtgcccaaccctgac
caaattgatgacaacaatgatggagtgggagacatatgcgaatcagactttgaccaagac
aaggtgatcgacaggatcgataactgcccagaaaatgcagaaatcacattgacagacttc
agagcctatcagacggttgtactggacccagagggtgatgctcagattgaccccaactgg
gtggttcttaaccagggaatggagattgtccagactatgaatagtgaccctggccttgct
gttggttacactgcattcagcggtgttgatttcgagggaaccttccatgtgaatacagtc
actgatgacgactatgctggcttcatctttggctaccaagattcttccagtttctatgtg
gtgatgtggaaacaaacggagcagacatactggcaggccacacctttcagagctgtagct
gaacctggcattcagctgaaggcagtgaagtccaacactggtccaggagagcatttgaga
aactctctctggcacacaggggacactaatgatcaggtgcgtctcctgtggaaggatcca
agaaacgttggctggaaagatcgggtatcataccgttggtatctgcagcaccgcccacaa
gtcggatacatcagggttcgtttctatgagggatcagagctggtggcagattctggagtg
acaattgataccacaatgagaggaggaagactgggagtgttctgcttctctcaagaaaac
atcatctggtcaaacttgaagtatcgctgcaatgacaccattccagaggacttccaggag
ttcagtacaaaaaatgacatggatcccctgtaa
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