Carassius gibelio (silver crucian carp): 127987040
Help
Entry
127987040 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127987040
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127987040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
LRR_1
LRR_LRWD1
ig
Ig_2
LRR_14
LRRNT
LRR_9
Cupin_1
V-set
Ig_C17orf99
Ig_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127987040
NCBI-ProteinID:
XP_052445274
LinkDB
All DBs
Position
B22:complement(27119132..27146720)
Genome browser
AA seq
605 aa
AA seq
DB search
MAGCPRLCLPGLFVLLITASLTHGQSCPQRCDCIPYQRAVMCQNKRLGSIPGGIPTDTRL
LDLSGNSLRWVEYNDLATLSKLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLTNLTTLDLSGNKLVILLDFTFQDLKNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSITGQSLSYLRGLVTLRLRYLSIPSLEEQNFHKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLIRLKE
LHLVGTNLISVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDRKSPVCATPVELRGKALSTFSDSALFDHFTCKRPKIRNRKLQQLT
AREGQVVSFVCQAQGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDGALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccacgcctgtgcttaccggggctgtttgtgctcctaatcactgcatcc
ctaacacatggccaaagctgcccacagcgctgtgactgtatcccttatcagagagccgtg
atgtgccagaacaagcgtctgggctctattcctggaggcatccctactgacacacggctg
ctggatctgagtggcaacagtttgcgctgggtggaatacaatgacttggcgactctctcg
aaacttgaagaattggacttgagcgagaatctcatcagcgtgttggagcctaacgccttc
tccagcttgctcaacctgagagtgttgcgtctacgagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcaccaacctcaccactctggatctaagtgggaataaactg
gtcatcctgttagacttcaccttccaggacttgaagaacctccgcaatttggaggttggt
gacaacgacctggtgtacatttcaaacaaggctttcctaggactggtggggctccgggag
ctaaccattgagaggtgcaatctgacctctataactggacagtctctttcctaccttcgc
ggcttggtgactcttcgattacgctacctcagtatcccttcgttggaagagcagaacttt
cataaactaggtggactgcggggtcttgagattgaccactggcccttccttgagtacatc
tctccacacagcttccaaggtctcaacctttcttggctctcgattactaacaccaacatt
tccaccgtgcctacaggagcccttcgcaacctaattcacttggcaagcctcaacctgtct
tacaaccccatctcagttcttgagtcctgggcattgcgggatcttatccgcttgaaggaa
ctgcacctagttggtacaaacctgatatcagtgcaaccctacggtcttggaggcctgcaa
cagatacgattgctcaacttgtcaaacaatggattagtgaccctagaggaggggtccttc
cactcggtcaacacgctggagacattgcgtgtagatggcaaccctctgtcctgcgattgc
cgcctactgtggatcctgcagcgccggaagaccctcaactttgacagaaagtcaccagtt
tgcgccacacccgtggaactgcgaggaaaagcactcagtaccttctcggactctgcactc
tttgaccatttcacctgtaagcggcctaaaattcgaaaccgcaaactgcaacagctgacg
gcacgtgaaggccaagtggtgtcatttgtatgtcaagcacaaggagacccaactccggtc
atcttttggatttcacctcagcgccgacgtatcacaaccaagagcactgggcgggtgatt
gtcctacctgaaggtacgctggagatccgttacgcccaggttacagatagtgggacttat
atctgcatcgcaagcaatgctggtggcaacgacacctactttgccaccctaacagtcagt
ggattgccattggatggtgctttggcagccaatcgcacctactatgtgggagatctaaat
gacacgaacttaaacgacacacgtgtcttcctaaaattcacattggatctcaagaccatc
ctggtgtccaccgcaatgggctgcatcatgtttttgggtgttgtgcttttctgtttcatt
ctcttatttgtgtggagccgaggacgaggtcagcacaagaacaatttctcagttgagtat
tcattcagaaaggtagatggtcccgctgccagtgggggtcaaggaggggcacgaaagttc
aacatgaagatgatataa
DBGET
integrated database retrieval system
