KEGG   Carassius gibelio (silver crucian carp): 127987295
Entry
127987295         CDS       T08819                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
  KO
K10839  UV excision repair protein RAD23
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
cgib04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127987295
  09124 Replication and repair
   03420 Nucleotide excision repair
    127987295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cgib03051]
    127987295
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127987295
Proteasome [BR:cgib03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    127987295
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      127987295
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD UBA_3 Rad60-SLD_2 Crinkler Dsc3_N UBA_2 Ubiquitin_4
Other DBs
NCBI-GeneID: 127987295
NCBI-ProteinID: XP_052445505
LinkDB
Position
B22:complement(9115454..9124608)
AA seq 422 aa
MLTITLKTLQQQTFKVQVDEELTVKALKEKIEEEKGQDAFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSAAPPQAPAPVPAAATTVSATVDETPAHQPSTPAAPPAVST
VPVSTSTPAPAPIEPAASVEPPVPPITAPPAASEVAAEKPESVSVTPTPISEEEKQEAQE
EQAIAQPEASITDEFGILEAAASILVTGQAYENLVTEIMSMGYEREQVISALRASFNNPD
RAVEYLLMGIPTEPEQPPQEVVQPTPVSNPTPPAPQRPQPPPATAGVESGATQSLANPLE
FLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPHAGEAG
AAEAPSAPQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTFD
DE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgctgacgatcactctaaagacactccagcagcagactttcaaagtgcaggtcgacgag
gagctgacggtaaaggctctaaaagagaagatcgaggaagaaaaggggcaagatgctttt
ccagctgtcggtcaaaagctaatctatgcaggcaaaattttgaatgacgatatacctcta
aaagaatacaagatagatgagaagaactttgtcgtggtgatggttacaaagcccaaatct
gcagcacctccacaagctcctgctccagtgccggcagctgccactaccgttagcgcaact
gtcgacgaaacccctgcacatcagccctcaactcctgctgcgcctcctgctgtctccaca
gtgcctgtatcgacctccactcctgctcctgctcccatagaaccagcggcatcagtggag
ccacccgtgccgcccatcacagcgccccctgctgcctcggaggttgcggcagaaaagcct
gagtctgttagcgtgactcccacgccgatctcagaagaagagaaacaggaagcccaagag
gagcaggccattgcgcaaccagaggccagcattacagatgaatttggtattttagaagca
gctgcgtccatactagttacaggtcaagcgtatgagaatttggtgacggaaatcatgtca
atgggttacgagagagaacaggtgatttccgccttacgagcaagtttcaacaatccggac
agagccgtggagtatctgcttatgggtattcccacagaacccgaacagccaccacaggaa
gtagtgcagcccacgccagtgtccaaccccacccctccagcaccacagcgacctcagcca
ccacctgccacagccggtgtggagtcgggagcgacgcagtccttggcgaacccgctggag
ttcctgaggaaccagccacagttccagcagatgcgtcagatcatccagcagaaccccgca
ctgctgcccgcgctcctgcagcaactcggccgcgacaacccgcagctcctgcagcaaatc
acgcagcatcaggagcgattcgtgcagatgttgaacgagccacacgcaggtgaagccgga
gctgctgaagctcccagcgcaccacagaccaactacatccaggtcacgccgcaggagaag
gaggccatcgagaggttaaaagctctggggtttccagagggactcgtcatccaagcctac
ttcgcctgcgagaagaacgaaaacctcgctgcaaacttcctgctccagcagacctttgac
gatgagtga

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