Carassius gibelio (silver crucian carp): 127987465
Help
Entry
127987465 CDS
T08819
Name
(RefSeq) 5'-3' exonuclease PLD3-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00564
Glycerophospholipid metabolism
cgib00565
Ether lipid metabolism
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
127987465
00565 Ether lipid metabolism
127987465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127987465
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
127987465
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
127987465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
OapA_N
Motif
Other DBs
NCBI-GeneID:
127987465
NCBI-ProteinID:
XP_052445768
LinkDB
All DBs
Position
B22:complement(52661221..52670885)
Genome browser
AA seq
481 aa
AA seq
DB search
MKSDIPYQKMVDVELSRGETHLGSQKHYRCLIILTCLTTILLILLSLQTLLVPMATSSSS
SSSSGEQEHLLIRETCTDPCRIVLVESIPEGLVFNSSTTHQSIYEAWLNLISGAQTSLDI
ASFYWTLTNNDTQTHEATANQGEQILEELGQLSGRVSVRIAIDKPSEKKPMDDIKFLTDS
GADVRMVNMRELTTGVLHTKFWIVDKKHIYIGSANMDWRSLTQVKELGAVVYDCSCLAED
LGKIFEAYWYLNQTTTVPAHWPKNYSTVYNKDTPMQLSLNGTDASVYLSSSPPSLCAEGR
TPDLQSILSVIADAQQFVYIAVMDYLPTMEYSSHKRYWADIDTQLRSAAYERNVRVRLLI
SCWENTNPIMFPFLRSLASLQDKSTLDIQVRIFTVPANPRQKHIPYARVNHNKYMVTDKV
AYIGTSNWSGDYFVNTAGSALVVNQTTSPTVQEQLQAVFERDWDSPYSTDINHRTNRKDV
C
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagatataccatatcaaaagatggttgatgtggagctaagcagaggagaaact
catcttggctcacaaaagcattacaggtgcctgatcatcctcacctgtttaaccacaata
ctgctgatcctcctgtcactccaaaccctgcttgttcccatggcaacatcctcctcctcc
tcctcctcatctggagagcaggagcatcttctaatcagagaaacctgtactgatccctgc
aggattgttctagtggagagtattcctgagggactggtgtttaactcctcgaccactcat
cagtccatttatgaagcctggctcaaccttatatctggtgctcagaccagtctggacatc
gcctccttctactggactctcaccaataacgacacacagacacacgaggccacagccaat
cagggtgagcagattctggaggagctagggcagctctcggggagagtctctgtccgaatt
gcaatcgataaaccatcagagaaaaaacctatggatgacatcaagttcctgactgattct
ggagctgacgtgcggatggtgaatatgcgagagctgacgacaggtgtgctgcacactaaa
ttctggatcgtggataagaagcacatctacataggaagcgccaatatggactggaggtca
ctaacacaggtgaaggagttgggtgccgttgtgtatgactgcagctgtcttgctgaggat
cttggcaagatcttcgaggcttattggtacctgaatcagaccacgaccgttcctgcacac
tggcccaaaaattactccacagtgtacaataaggacacacccatgcagctgtcactcaat
gggaccgatgccagcgtctatctatcaagctctcctccttcactgtgcgccgagggccgg
actccagacctgcagtctatcctcagcgtcatcgctgatgcccagcagttcgtctacatc
gctgtgatggactatctgcccactatggagtactccagccacaaaaggtactgggcagat
atcgacacccagctgcggagcgcggcttatgagcgtaatgttcgtgtgcgtctgctgatc
agttgttgggaaaataccaaccccatcatgttccctttcctccgttcactagcatcctta
caggacaagagcacactggatattcaagtgagaatttttactgtgcctgccaaccctcga
cagaaacacattccctacgccagagtcaaccacaacaagtacatggtcacagataaagtt
gcttacataggcacgtctaactggtccggagactactttgtgaacaccgctggatctgcg
ttagtggtgaaccagaccacaagccccacagtccaggagcagctgcaggcagtgttcgag
agagactgggactctccgtacagcactgacatcaaccacagaaccaaccgcaaagacgtg
tgctag
DBGET
integrated database retrieval system
