Carassius gibelio (silver crucian carp): 127987719
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Entry
127987719 CDS
T08819
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127987719
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127987719
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127987719
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127987719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127987719
NCBI-ProteinID:
XP_052446068
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All DBs
Position
B22:7522006..7529196
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AA seq
471 aa
AA seq
DB search
MSSHPRRVRLKPWLVSQVDTGTFPGLVWLDREAKRFQIPWKHATRHTPQQEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMKPLKIYDVCDIPQTS
SNPGSVPTYESDGDEDDVPDTPEPPPPPYPPHGMSSSPLGPVWTPPGSVSPMQPPSCPPP
SAPPSVEVWPKKEPQDVEMQPPPMELQTQTPLEAMFATPETWISSLPMTDLEVQFYYRGK
EVCPPVTVSNPQGCRLFYGDLGPIVNQEELFGPVSLEQVRFPSTEHITNDKQRVFTSRLL
DVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNTPNLIERQHRVKLFCLESFLSGV
VAHQRGMLSSESPLYDIHLCFGEEWPDGRPRERKLIMVQVVPVVARMISEMFSGDCTRSF
DSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQDNWPLPPSMQLSQTQH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcacccgcggcgtgtgcggctcaagccctggctggtgtctcaggtggacacc
gggacgtttccgggtctggtgtggctggaccgcgaggccaaacgcttccagatcccctgg
aaacacgccacgcgccacacgccgcagcaggaggaggagaacaccatctttaaggcctgg
gccgtggagacggggaagtatcaggagggcgtggacgagccggatccggccaaatggaaa
gctcagctgaggtgcgccctcaacaagagccgagagttcaacctcatctacgacgggacc
aaagaggttcccatgaaaccgctgaagatctacgacgtgtgtgacatcccccagacctcc
agcaaccccggttcggttcccacgtacgagtctgacggtgatgaagacgatgttcctgac
acccccgagcctcctcctcctccgtatccacctcacggcatgagctcgtctcctctgggg
ccggtctggactcctccgggctccgtgtcccccatgcagccgcccagctgtccccctccc
tctgctcctccctcggtggaggtgtggcccaagaaggagccgcaggacgtggagatgcag
cctccgcccatggagctgcagacgcaaaccccgctggaggccatgttcgccacgccggag
acctggatcagctcgctgcccatgacggacctggaggtgcagttctactaccgcggtaag
gaggtgtgtcctccggtgaccgtcagtaacccgcagggctgtcgtctgttctacggcgat
ctggggcccatcgtcaaccaggaggagctgttcggccccgtcagtctggagcaggtgcgc
ttcccctccaccgaacacatcaccaacgacaagcagcgcgtgttcaccagccgcctgctg
gacgtcatggaccgcggcctcatcctggaggtgagcggacacgacatctacgccgtgcgt
ctgtgtcagtgtaaggtgtactggtccggcccctgcgcacccaaccccaacacccccaac
ctgatcgagcgccagcacagggtcaagctcttctgcctcgagtccttcctcagcggcgtg
gtggctcaccagcgcgggatgctgtcgtccgagtctccgctctacgacattcatctgtgt
ttcggagaggagtggcctgacggcagaccccgtgaacgcaagctcatcatggtgcaggtg
gtgccggtggtggcgcggatgatcagcgagatgttctcgggcgactgcacgcgctccttc
gacagcggcagcgtgcggctgcagatctccatcccggacatcaaggacaacatcgtgacg
cacctgaagcagctgtaccggctcctgcagacgcaccagggccaggacaactggcctctt
cctcccagcatgcagctgtcgcagacgcagcactga
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