Carassius gibelio (silver crucian carp): 127988004
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Entry
127988004 CDS
T08819
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127988004
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127988004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
CarbopepD_reg_2
Ig_2
TSP1_spondin
ig
TSP1_ADAMTS
Ig_5
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127988004
NCBI-ProteinID:
XP_052446453
LinkDB
All DBs
Position
B22:25755907..25771203
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AA seq
1265 aa
AA seq
DB search
MHLAISGCGTMWDFTVGTLALSTVFVVSLAQGPIWDSSHLQRLNKTDRNRKLAYNSLVDP
KTTGVTEWTSWFNIDHPGGNGDYERLEAIRFYYRERVCSRPVAIEARTTDWVAAADTGEV
VHSSLEKGFWCINKEQPFGRICSNYHVRFQCPPVHSYWTDWNEWTPCSATACNDVGIQVR
QRKCMSTQPLPLLLSPVCVGPHIERRECSTPPCEAVWSQWGLWSACSVTCGKGRRTRRRT
CHRSSTKIQCTGRPVEVQKCGNPCPVACKRVCPGGRPSKDCSYCICDGQILHGEVFSVTG
VPVPNATVALASQAKVVRAHTDAKGQFKIDGLCTSPQTRVVIEKDKFAPVTLPVSNNSTD
ELWVRAILRSSEKPYIEKHPEDKVRYEGQRATLCCRATGSPKPDKYYWYHNGTLLNRTIY
KYDEDLILRDLKPEQSGQYHCKATSLTGSIKSTSAVLTVFAKGTPACNSTPENHLIKLPL
DCKQPGTDSKFYNAGRCPHNKCPGSLDFDMRCRDGSGFCCGVKQMNARKINCGRYTLPIK
VVSECGCQTCVEPKILVRGRVVSADNDEPLRFGHIYIGRERIGTTGYQGGFTIQVSPDTQ
RLVVNFVDPSQKFIDTIKVFIFDKRGGSVYHDVKVMRKQEPVDINAAESNTIYLGEIKDE
DPIGQLVIPPNSFHKNTGEVYEGTVKASVTFLDPRNITMAAAAPGDLNFVDNEGDMLPLR
TYGMFSVDFRDGANQEVLGTGAVQVLLDTEHVKMQEHIPAMKLWSLNPDTGIWEEESNFQ
PTQTTVAGTGRNKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLPNEQL
EGVVINLINLEPKPGYSSNPRAWGRFDSVITGPNGACLPAFCDAQRADAYTAYVTAIMGG
EELEAAPSMPKMNPNIIGVSQPYLGKLDYQRSDHEDPALKKTAFRINLSKPNPNNFDETN
GPIYPYQSLIACENAPVDANHFRFFRVEKDKYEYNVVPFEESDLTSWTGDYLSWWPNPQE
FRACYIKVKIHGATEIMVRSRNMGGTHPQTRGQLYGIRDIRSTRDLHHPNTSAACLEFKC
SGMLFDQGIVDRSLISVIPQGNCRRLGINGLLQEYLIKHPPVLQNNESHAFNMLAPVDPL
GHNYGIYTVTDQNPRVAKEIAIGRCFDGTSDGFSREMKSDSGVALTFSCPKRTVNRESLF
QRLQTNPGLTLTQMAREMRESQGLQVRRGSTQMVAYPFGQQGRSQNRGATNNNRRRPATR
TEPRQ
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggccatcagtggctgtggcactatgtgggacttcacagtcgggacgttggcg
ctgtctaccgtctttgtagtgtctctggcacaaggacccatctgggacagctcacatctt
cagaggttaaacaaaaccgacaggaacagaaagctggcttacaacagcctcgtggatcca
aagaccacaggtgtaaccgagtggacatcctggttcaatatcgaccatccaggaggaaac
ggtgactacgagaggctagaagccatccgcttctactaccgagaaagggtgtgctcacga
cctgtagccatcgaggcccgtaccacggactgggttgcagccgcggacacgggggaggtg
gtccattccagtctggaaaaaggcttctggtgtatcaataaggagcagccatttggtcgc
atctgttccaactaccatgtgcgattccagtgtccaccagtccactcatactggactgac
tggaatgaatggacgccttgctctgccactgcctgtaacgatgttggcatccaagtccgt
cagaggaaatgcatgagcacacaacctcttccactgcttctttcgcctgtttgtgtggga
cctcacattgaacgcagagagtgttcaaccccgccatgcgaagctgtgtggagccaatgg
ggtttgtggagtgcttgctcagtgacctgcggtaaaggccgcagaacaagacgtaggaca
tgtcacagatcttctactaagattcagtgtacaggacgacctgtagaggtgcaaaaatgt
ggaaatccatgtccagtggcatgcaaacgtgtctgtcctgggggacgtcccagtaaggac
tgtagctactgtatctgtgatggacaaatactacatggggaggtcttcagtgttacaggt
gtccctgtgccaaatgcaacagtggctctggctagccaagccaaggttgtccgcgcccac
actgatgccaagggccagttcaagattgatggactgtgcaccagcccacagacccgagtg
gtcatagaaaaggataaatttgcacccgtcactctccctgtttccaacaatagcactgat
gaactctgggtgcgggccatcttacgatcctcagaaaagccgtatattgagaagcaccca
gaagacaaagtgcgttatgagggacaacgtgcaaccctttgctgtagagccacaggatca
ccaaaacctgacaaatattactggtatcacaacggaaccttactgaatcgcacaatatac
aagtatgatgaagatctgattttgcgagacctgaaaccagagcagtcagggcaatatcac
tgcaaagcaactagtctgacaggcagcataaagtctacttcagctgtcctcactgttttc
gccaaaggaacaccagcatgcaactcgacacctgaaaatcacctgataaaattgccatta
gactgcaagcagcctggaacagactccaagttttacaatgcaggtcgctgtccacacaac
aaatgccccggatcgctggactttgacatgcgttgcagggatggatctggcttctgctgt
ggggtcaaacaaatgaacgctagaaagatcaactgtggtcgttacaccctgcctatcaaa
gtcgttagtgagtgtggctgccagacttgtgtggagcccaaaattcttgtacggggaagg
gtggtgtcagcagacaatgatgaacccctgcgctttggacatatttacatagggagggaa
cggataggtaccacaggatatcagggtgggttcacaatccaggtgtctccagatacacag
cgtcttgttgtaaactttgttgacccttctcagaagttcattgatacaatcaaggttttt
atctttgacaagagaggaggttctgtctatcatgatgtaaaagtgatgaggaagcaggaa
cctgttgatataaacgctgcagaaagcaataccatttacctaggtgaaataaaagatgag
gaccctattggtcaactggtcatacctccaaactctttccataaaaacacaggggaagtg
tacgaagggacggttaaggccagcgtcacgttccttgaccctcgcaatattactatggct
gctgccgctcctggcgatctcaactttgtagacaatgaaggagacatgctacctcttagg
acatatggaatgttttcagtagatttccgagatggagcaaaccaggaggttctaggaact
ggtgctgtccaggttctccttgatacagagcatgtaaaaatgcaggagcacatccctgct
atgaaactctggtccctcaatcccgatactggcatttgggaggaggagagtaactttcaa
cccacacaaactactgttgctggcactgggaggaacaaacgagaggagcgcaccttcctg
atagggaatatggaaatcagggagcgtagattgttcaatctcgatgtacctgagaatcgc
cggtgctatgtcaaagtgagggcgtacatgagtgacaagttcctgcccaacgagcaacta
gaaggagtggtaataaacttgataaacctggagcctaagccaggctactcgtcaaatccg
agggcttggggacgctttgatagtgtgataacgggaccaaacggtgcttgtcttccagct
ttctgtgatgctcagagggctgacgcatacacggcttacgtcacagctataatgggaggt
gaggaactggaagcagcaccctcaatgccaaaaatgaatccaaacattattggtgtgtct
cagccgtacttagggaagttagattaccagcgctccgatcatgaggatccagcacttaag
aaaacagcttttcgaatcaacctatccaaaccaaaccctaacaattttgatgaaacaaac
ggaccaatctatccttatcagagtttaattgcatgtgaaaatgcacctgttgatgccaac
cactttcgtttcttccgtgtcgagaaagataaatatgagtacaatgtggtaccctttgag
gagagtgacctcacgtcttggactggagattatctttcctggtggccaaatccacaagag
ttcagggcttgctacatcaaagttaagattcatggagctacagaaatcatggtacggtca
agaaacatgggtggcactcatcctcagacaagaggtcagttgtatggcattagagacatt
cgtagtacccgtgacttacaccatcctaatacctctgctgcttgtcttgagttcaagtgc
agcgggatgctctttgatcaaggtattgtagataggtcactaatttctgtcatcccacaa
gggaactgtcgtcgtctaggcatcaatggtctcctccaagagtatctgataaagcatccc
cctgttcttcagaacaatgaatctcatgctttcaatatgttagctcctgtcgatccactt
ggacacaattatggaatatacactgtcactgaccagaacccacgcgttgctaaagagatt
gccattggccgctgctttgatggaacttcagatggtttttccagggagatgaagtcagat
tctggagtggcactgacgttcagctgccctaaaagaactgtgaatcgtgagagcttattc
cagcgcttgcaaacaaatcctggcctaacactaacacagatggcacgggagatgagggag
tcacagggactgcaagtcagaagagggtcaacccaaatggtggcctacccttttggccag
cagggcaggagccagaaccgcggagccacgaacaataacagaaggagaccagctacaagg
acagaaccaagacagtag
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integrated database retrieval system
