Carassius gibelio (silver crucian carp): 127988311
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Entry
127988311 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127988311
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127988311
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127988311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-ANAPC11
DUF7027
Prok-RING_4
CxC1
Hemotin
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
127988311
NCBI-ProteinID:
XP_052446942
LinkDB
All DBs
Position
B22:complement(36677346..36696554)
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AA seq
404 aa
AA seq
DB search
MPLSVTVCGSENKKEVFTSRVTEADLKMLLSLGMLMLSATQIYTIFTVQIFAFLNLLPVE
ADISAYSFDNKTENFDDLPSRFGYRLPSEGLKGFLIGARPENACVPIDPPPLRDNLSSTF
IVLIKRFDCNFDVKVLHAQKAGYKAAIVHNVNSDDLISMGSNDLDILKQIDIPSVFIGEE
TANSLKEDYIYEKGGHVILLPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRA
RRSRLRKDQLKKLPIHKFKKGDSYDVCAICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTK
TKKTCPVCKQKVVPSDGDSESESESGDSGGEENEASENTPLLRSLASTSAHSFGTMSGSL
SHHDAESSDYDERSDTTDSEEEVTVETVVVQLQQGRPDDTEANA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtctgtaacagtatgcggatcggagaataaaaaggaagtttttacatcacgt
gtaactgaagcagatcttaagatgctgctctctttggggatgctgatgctctcggccaca
cagatttacaccattttcacggttcagatattcgccttcctcaatctgctgcccgtggag
gccgacatatcagcatattcatttgacaataaaacggagaactttgatgacttgccgtct
cgatttggctacagactgcccagtgaaggactgaagggtttcctgatcggagcccgtccg
gagaacgcctgtgtcccgatcgacccccctcccctgcgggacaacctcagcagcaccttc
atcgtgctgatcaagcgcttcgactgtaactttgacgtcaaggtcctccatgcgcagaag
gccggctacaaggcggcgattgtccacaatgtgaactctgatgacttaatcagcatggga
tccaacgatctggatatcctgaagcagatagacattccttcagtgtttattggtgaagaa
acggccaactctctcaaagaggattacatctatgagaaaggtggtcatgtgattctcctg
ccggacttcagcttgcctctggaatattatctgatcccattcctcatcatcgttggaatc
tgcctcatcctcattgtagtgttcatgatcacaaagtttgtacaggaccgacacagagcc
aggagaagtcgcttacgcaaagaccagctgaagaaactcccaattcacaagtttaaaaaa
ggggattcgtatgacgtgtgtgccatttgtttggatgagtacgaggagggggacaaactg
cgggttcttccctgctcacacgcctatcactgcaagtgtgtggacccatggctgaccaaa
accaagaagacctgccccgtgtgcaagcagaaggtggtgccatccgacggcgactctgag
tccgagtctgagtccggggacagcggcggcgaggagaacgaagcgtcagaaaacacgccc
ctgctgcgatctctggcctccaccagcgcccattcctttgggaccatgtccggctcgctg
tcccatcacgacgccgagtcctcggactacgacgagcgcagcgacacgaccgacagcgag
gaggaggtgaccgtggagactgtggtcgtacagctgcagcaggggcgtcccgacgacacg
gaggccaacgcttga
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integrated database retrieval system
