Carassius gibelio (silver crucian carp): 127988330
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Entry
127988330 CDS
T08819
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127988330
09123 Folding, sorting and degradation
03018 RNA degradation
127988330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127988330
03041 Spliceosome [BR:
cgib03041
]
127988330
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127988330
mRNA degradation factors
5'-3' decay
Lsm complex
127988330
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127988330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
127988330
NCBI-ProteinID:
XP_052446979
LinkDB
All DBs
Position
B22:21252043..21253578
Genome browser
AA seq
103 aa
AA seq
DB search
MADKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagacaagaaaaagaaggagagtatttttgatttgtcgaagtacatcgac
aaacatatcagagtaaagttccaaggaggtcgtgaagcaagtggggtcttaaaaggcttc
gacccgctgttgaatctcgtgttggatggcaccattgaatacatgcgagatcctgatgat
cagtacaagctgactgaagacaccaggcagctcggtctggttgtatgtcgagggacgtcc
gtcgtgctgatctgtccacaggacgggatggaggccattccgaaccctttcattcaacag
caggatggataa
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