Carassius gibelio (silver crucian carp): 127988335
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Entry
127988335 CDS
T08819
Name
(RefSeq) uncharacterized protein LOC127988335
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04141
Protein processing in endoplasmic reticulum
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04218
Cellular senescence
cgib04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127988335
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127988335
04217 Necroptosis
127988335
04218 Cellular senescence
127988335
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127988335
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127988335
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
127988335
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C2: calpain family
127988335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127988335
NCBI-ProteinID:
XP_052446982
LinkDB
All DBs
Position
B22:complement(30018996..30043767)
Genome browser
AA seq
1420 aa
AA seq
DB search
MSGVASTLAKKRALAAGFGSNANATKYLNQDFEALRSQCLSGGTLFSDPYFPAAPESLGF
KELGPSSSKTRGLVWKRPGELRSKPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV
LARVVPDGQGFGQNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELVFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGTTSEGFEDFTGGIAESYELSKAPSNMFQIIQKALEAGALLGC
SIDITSASDSEAVTRQKLVKGHAYSLTGATEVNYRGRMEKLIRIRNPWGQVEWTGAWSDG
SSEWNNISSQRPDASAEDGEFWMSFSDFLSHYSRIEICTLTPDAITSDSIKHWAVTNHDG
TWRRGSTAGGCRNNAYTFWMNPQYVIKLDEEDDDPDDNEVGCSFVVGLIQKNRRRLRKAG
EDMHTIGFAIYEVPPQFRGQRDVHLDKNYFLTHAQKARSETFVNLREVCTRFKLPPGEYL
IVPSTFEPNKDGDFCLRVFSEKQTETLPCDDPVDAELPDETVSDSEVDSGFRGMFLKLAG
ADMEISATELMTILNKIVAKRTDIKTDGFSLETCRVIVNLMDDSGNGKLGLGEFATLWKK
IQRYLGIYKKNDMDNSGTMSTPELRLALKEAGFTLNNAIFQLLVARYAETDMTLDFDNFV
SCLMRLEMMFRVFKKLDPHHSGFIELDFVQLEAHTRNLSYHLENCPPWTFSLKSWLVMYS
IGVSSRIYKERLQAEGMGTNDNAVKFLNQDYEELKRECLESGRLFEDPCFPAVPQSLGFK
ELAPYSSKTHGVQWIRPTELSSNPEFIVGGATRTDICQGALGDCWLLAAIASLTLNDRLL
HRVVPHGQSFMDEYAGIFHFQFWQFGDWVDVVVDDRLPVKDKELMFVHSAEGNEFWSALL
EKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRQAPKDLHRIIAKALERGSLLGCS
IDITSAFDMEAVTFKKLVKGHAYSVTGLREVNFSGSRERLIRIRNPWGQVEWTGAWSDNS
TEWNGIDPAEREEMNNHMEDGEFWMPFQEFKRQFSRLEICNLTPDALSEDSLNFWNTIKF
NGTWRRGSTAGGCRNNPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRYRK
QGQDMHTIGFAVYEVPEEFHGSQSVHLKKDFFLRHSSCARSETFINLREVSTRLKLPPGE
YLVVPSTFEPGKEADFVLRVFTEKQSETQEMDDEIAFNLEDEEEVSEEDMEDSFKKLFAQ
LSGEDMEISVHELRTILNRVVSKHRDVKTDGFSLESCRCMVSLMDKDGSARLGIVEFQIL
WNKIRKWLGIFRQFDLDKSGTMSSYEMRLAVESAGFKLNNKLHQVIVARYSDGDTIDFDN
FVCCLVKLEAMFRTFRELDKEGSGIAQLNVSEWLYLTMCG
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtcgcctctaccctggccaagaagagagcgctggctgcagggttcgggtct
aacgccaacgccaccaaatacctcaaccaggacttcgaggcgctcaggagccagtgtctc
agcggggggaccctgttctcagacccctatttcccagccgcacccgaatccctgggcttt
aaagaactcggacccagctcgtccaaaaccagaggactagtgtggaaaagacctggggag
ctgcgctcaaaaccccaattcatcgtcggaggagctacacggacggatatctgtcaagga
gctctgggtgactgctggctgctagcggccatagcctctctgaccctgaatgaggatgtt
ctggcacgagtggtgcccgatggacagggcttcggtcaaaattatgccggaatcttccat
ttccagttctggcagtttggcgagtgggtggatgttgtcattgatgaccggctgccggtg
aaagacggcgagttggtgtttgtgcactccgccgagggaaacgagttctggagcgccctg
ctggagaaggcctatgcgaaggtgaacggctgttatgaagctctgtctggaggaaccacc
agtgagggctttgaagatttcactggaggcatcgctgagagctacgagctgagcaaagct
ccttccaacatgtttcagatcatccagaaagccctggaggctggagctttgctgggctgc
tccatcgacatcactagtgcctctgattcagaagcagtcacccgccagaagctggtgaaa
ggccacgcttactcactcacgggggcaaccgaggtgaactatcgcgggcgcatggagaag
ctgattcgtatacgcaacccttgggggcaggtggagtggaccggagcctggagtgatggt
tcatccgaatggaataatatttcttcacagcggccggacgccagcgctgaggatggagaa
ttctggatgtcattctcagatttccttagccattactctcggatagagatctgcactctg
accccggacgccatcaccagcgattcaattaaacactgggccgtgaccaaccacgacggc
acatggaggagaggctccaccgctgggggctgcagaaacaacgcttacacattctggatg
aatcctcaatatgtgattaagctggatgaagaagatgacgacccagatgacaatgaggtg
ggctgcagtttcgtggtggggttgatccagaagaaccggcgtcgtctgaggaaagcggga
gaggacatgcacactattggctttgctatttatgaggttcctccacagtttcgaggtcag
cgtgatgtgcacctcgataagaactacttcctgacacatgcgcagaaagctcgctctgag
accttcgttaacctgagagaggtctgcacacgcttcaagctgcctcctggagagtacctc
atcgtgccgtccaccttcgaacccaacaaggacggagacttttgcctgcgagtcttttcc
gaaaaacagaccgaaacactaccatgtgatgaccctgtggatgctgaacttcctgatgag
actgtctcagacagtgaagttgattctggattcagaggcatgttcttaaaactcgctgga
gctgacatggaaatatcagccacggagctcatgactatcttaaacaaaatcgtcgcgaaa
cgaactgacataaagacggacggcttcagtttggaaacgtgtcgtgtcatagtgaacctc
atggatgacagtgggaacggaaaactcggtttgggagagttcgctactctgtggaagaaa
attcagcgataccttggaatttacaagaagaatgacatggataattcaggaaccatgagc
actccagagctgcgtttggcgctgaaagaagccggtttcactcttaataacgctatattt
cagctgctggtagcacgttacgccgagacagacatgactcttgactttgataactttgtg
tcctgtctcatgcgtctggagatgatgttccgggtattcaaaaagctggatcctcaccac
agtggcttcattgagctggactttgtgcagctcgaggcccacacaaggaacctgagctac
cacttagagaactgccctccatggacattttccctgaaatcatggctcgtcatgtattca
attggagtgtcgtcgcgtatttacaaggaacggcttcaggcagaagggatgggaaccaat
gacaatgcggtcaagttcctgaaccaggactatgaggagctgaagagagagtgtctggag
agcggcaggctgtttgaggacccctgcttcccagccgtgcctcagtcactgggcttcaag
gagctcgcgccatactcctccaaaacacatggtgtgcagtggataaggcccactgagctg
tcaagcaaccctgagtttatagtgggcggagccacacgcacagatatttgccagggagcc
ctaggtgactgttggctgttagctgccatcgcatccctgactttaaatgacaggctgctt
cacagagtcgttcctcatggacaaagctttatggacgagtacgccggcatcttccacttc
cagttctggcagtttggcgattgggtggacgttgtggtcgatgaccgtttgcctgtgaaa
gataaagagctgatgtttgttcactcagcagagggaaatgagttttggagcgccttgctg
gaaaaagcctatgccaagctgaatggctcatatgaagctctgtcgggagggtccaccact
gaaggttttgaggacttcacgggtggagtggccgagatgtacgagctgcgtcaagctccc
aaagacttgcaccgcatcattgccaaagccttggagagaggctcactgttgggctgctct
attgatatcaccagtgcctttgatatggaggctgtaacttttaagaagctggtgaaggga
catgcgtactccgtcacgggtctcagagaggtgaatttcagtggcagcagagagaggctg
atccgcatccgaaacccttgggggcaagttgaatggacaggggcttggagtgacaattct
accgagtggaatgggattgatccagcagagagagaggaaatgaacaaccacatggaggat
ggcgagttctggatgccatttcaggagttcaaacgtcagttttctcgtctggagatctgt
aacctcacaccagacgctctgagtgaagattctctaaatttctggaacacgattaagttt
aacgggacttggaggagaggaagtacagcagggggctgcaggaacaaccccaatacattc
tggataaaccctcaatataagatcacactgctggaggaagatgatgatcctgaggatgat
gaggtggcctgcagcttcctggtggccttaatgcagaaggacaggagacgttaccgcaag
caagggcaggacatgcacaccattggcttcgctgtatatgaggtcccagaagagtttcat
ggctcccagagcgttcacctcaagaaggactttttcttgcgtcactcatcctgcgctcgc
tcagaaaccttcattaacctgcgggaagtcagcacacgactgaagctgccaccgggcgag
tatctcgtagtcccttccacttttgagcccggaaaagaggccgattttgtcctgcgagtc
ttcacggagaaacagtcagaaactcaagaaatggatgatgagattgcgtttaacttggaa
gatgaagaggaggtttcagaggaggacatggaagactcttttaaaaagctgtttgcacag
ctgtctggagaggacatggagatttcagttcatgagctcaggaccattctgaaccgagtg
gtcagcaaacacagggacgtgaagaccgatgggttcagtttggagtcgtgtaggtgcatg
gtcagcctgatggataaagatggaagtgcacggctgggaattgtggagttccagattcta
tggaataaaatcaggaagtggctgggcatttttagacagtttgatctggataaatctggc
acaatgagctcgtatgaaatgcgcctcgctgtggagtcagctggttttaaactcaataac
aagctacatcaagtaattgtggcacggtattctgatggagatacgatcgacttcgacaat
tttgtctgttgcctggtcaaactggaggctatgttcaggacttttagagaactggacaaa
gagggctcaggcatcgcacagctcaatgttagcgagtggctgtacctgaccatgtgtggt
tga
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