KEGG   Carassius gibelio (silver crucian carp): 127988433
Entry
127988433         CDS       T08819                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib04141  Protein processing in endoplasmic reticulum
cgib04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127988433
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127988433
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    127988433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127988433
   04131 Membrane trafficking [BR:cgib04131]
    127988433
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127988433
Membrane trafficking [BR:cgib04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    127988433
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127988433
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    127988433
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 127988433
NCBI-ProteinID: XP_052447151
LinkDB
Position
B22:32639470..32647656
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPHDFGLFL
ACGSSDGAISVLTCSGDGHWDVKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPSYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgtcatcaacacagtggacacctcacatgaggacatgatccatgatgctcag
atggactattacggcaccagactggccacctgctcctccgatcgctctgtgaagatcttt
gacgtcaagaacggaggccagatcctcgtggctgatctgaggggtcacgagggtccggtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaacggcacctgggacaagatgtatgaatacacc
ggccacgactcgtccgtgaactccgtttgctgggggccgcatgacttcggcttgtttctg
gcctgtggcagctcagacggtgccatttctgtgctgacctgctccggagatggacactgg
gatgttaagaagatcaacaacgcacatacaatcggctgtaacgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccagctacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaggaagaggacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctcccgaccagcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggacgtgtgacgacccagccggcaacacctggacggccaaacttctccacaaattc
aatgatgtggtgtggcacgtgagctggtccatcacaggaaacatcctggccgtgtcagga
ggggacaacaaagtgaccctgtggaaggagtcagtggatggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccagcagaacgagcag
tga

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