Carassius gibelio (silver crucian carp): 127988433
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Entry
127988433 CDS
T08819
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib04141
Protein processing in endoplasmic reticulum
cgib04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127988433
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127988433
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127988433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127988433
04131 Membrane trafficking [BR:
cgib04131
]
127988433
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127988433
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127988433
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127988433
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127988433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127988433
NCBI-ProteinID:
XP_052447151
LinkDB
All DBs
Position
B22:32639470..32647656
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPHDFGLFL
ACGSSDGAISVLTCSGDGHWDVKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPSYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtcatcaacacagtggacacctcacatgaggacatgatccatgatgctcag
atggactattacggcaccagactggccacctgctcctccgatcgctctgtgaagatcttt
gacgtcaagaacggaggccagatcctcgtggctgatctgaggggtcacgagggtccggtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaacggcacctgggacaagatgtatgaatacacc
ggccacgactcgtccgtgaactccgtttgctgggggccgcatgacttcggcttgtttctg
gcctgtggcagctcagacggtgccatttctgtgctgacctgctccggagatggacactgg
gatgttaagaagatcaacaacgcacatacaatcggctgtaacgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccagctacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaggaagaggacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctcccgaccagcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggacgtgtgacgacccagccggcaacacctggacggccaaacttctccacaaattc
aatgatgtggtgtggcacgtgagctggtccatcacaggaaacatcctggccgtgtcagga
ggggacaacaaagtgaccctgtggaaggagtcagtggatggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccagcagaacgagcag
tga
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