Carassius gibelio (silver crucian carp): 127988442
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Entry
127988442 CDS
T08819
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127988442
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127988442
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127988442
NCBI-ProteinID:
XP_052447162
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All DBs
Position
B22:complement(35450207..35452263)
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AA seq
315 aa
AA seq
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MYNMMETELKPPVSQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHGRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagctgaagcccccggtgtcccagccgaacacggggggc
acggggaacaccaactcttcgggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgcctcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgacgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaatacagaccccggaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggcgggcttctggcgccgggcggcaacggcatgggcgccggtgtg
ggtgtaggggccggtttgggcgctggggtcaaccagaggatggacagttatgcccacatg
aacggctggaccaacggaggctacggcatgatgcaggagcagctgggttacccgcagcac
ccgggactgaacgcgcacaacacggcgcagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcaaagcacgccgggaatgacgctgggctccatgggctcggtg
gtcaagtccgagtccagctcgagtccgccggtggtcacgtcgtcctctcacggccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcctggcgcggag
gtgcaggaccagagcgcgcagagcagactgcacatgtcccaacactaccagagcgcgcct
gtgcccggcacgacgatcaacggcaccatccccttatcacacatgtaa
DBGET
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