Carassius gibelio (silver crucian carp): 127988461
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Entry
127988461 CDS
T08819
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127988461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127988461
03036 Chromosome and associated proteins [BR:
cgib03036
]
127988461
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127988461
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127988461
PBAF complex
127988461
GBAF(ncBAF) complex
127988461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
127988461
NCBI-ProteinID:
XP_052447180
LinkDB
All DBs
Position
B22:complement(16089369..16103618)
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AA seq
510 aa
AA seq
DB search
MAARGGFQPATPGGGGAPMGPGPPVAGAGPGMGPGTPSGRMGPGGPQNHMYRSPMPGYPR
PGMPPANRMTPQGPPMGPPGYGASPVSRPGMPVMDPSRKRPPPNQIQQVQQQNRNQHAKK
KKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIF
ISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELD
KDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLARLL
GIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHALL
MPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIH
ETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYYQP
WAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtggtggttttcagcctgcgactcccggaggcggcggagccccgatggga
cccggcccgccagtagccggtgcagggcccggaatggggcccggtacgccctcaggacgg
atggggcccggcggcccgcagaaccatatgtatcgatccccgatgcccggatacccgagg
ccaggaatgcctccggccaatcgtatgacccctcagggaccccccatgggacccccaggt
tacggggccagtccagtgtcccgccccggtatgccagtcatggacccgtcccgcaagcgc
ccgccgccaaatcagatccaacaggtccagcaacagaatcgcaaccaacatgccaagaag
aagaaaatggcagataaaatactacctcagagaatccgagagctagttcctgagtctcag
gcgtacatggacctgctagcgtttgagagaaagctggaccagaccatcatgcgcaaaaga
ctcgatatccaggaagctctcaaaagacccatcaagcaaaaacgaaaactacggatattt
atctccaacaccttcaaccctgccaaaccggatgcagaggacggcgaaggaaccgttgca
tcttgggagctgcgtgtggagggacgacttcttgaagacactgctgtgtccaagtatgaa
gccaccaagcagaagaggaagttttcttcttttttcaagtctttagtgatcgagttggac
aaagacttatatggacctgacaatcatttggtggagtggcaccgaacagccacgactcaa
gagaccgatggatttcaggtgaagaggcctggagatgttggcgtccgctgtactgtactc
ctcatgctggattaccagcctcctcagtttaagttggaccccagacttgcccggttgttg
gggatccacactcaaacgcggcctgtgatcatccaggctctgtggcagtacgtcaagacc
cacaaactccaggaccctcatgaacgagagttcattaactgtgataaatacctccaacag
atttttgaaacccagaggatgaagttttctgagattcctcaacggctgcatgcactactg
atgccccccgagccaatcatcatcaaccatgtcataagcgtggaccccaatgaccagaag
aagacggcgtgctatgatatagacgtggaggtagatgacaccctgaagactcagatgaac
tctttcctgctttccacagccagtcagcaagagattgcaggcctcgacaacaagattcat
gagaccatcgaaaccattaaccacctgaagactcaaagggagttcatgttgagcttcgca
cgagacccgcagggcttcatcaacgactggctccagtcacaatgccgagacttgaagacc
atgacagatgtggttggaaacccggaggaggagaggagagccgagttctactaccagccc
tgggctcaggaagctgtgtgccgatatttctattcaaaggttcagcaaaggagacaggag
ctggaacaggctcttggcattcgaaacacataa
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