Carassius gibelio (silver crucian carp): 127988579
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Entry
127988579 CDS
T08819
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127988579
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127988579
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
127988579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
DUF3482
Motif
Other DBs
NCBI-GeneID:
127988579
NCBI-ProteinID:
XP_052447317
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All DBs
Position
B22:complement(26052635..26103814)
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AA seq
1332 aa
AA seq
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MSLLRLCAYSAALTRSFAVDRSVQRFLNGDYCHLCLRIRSNGERQIQDKTWATIYQRHYS
AIAKKEDGKKRFCEQSQLLDVLEARIQQLQSDAVVDVKHSKVQIIKTQQKIKKTSPGNSQ
KNLPGEKAEMLKSGPSAKKGGTEGVMPSKAHASRWMEKLKRERWINPKKQTSHRTHDKPV
VGKNSKGSSMRPGTSTKTITTGKISETRTKGEDSKTSASTTTSSKVDSVQKKSKKKVSRV
SESLAVRFSGVQKISSSEAGSVSEMSTQEKLADKEFEVVEEFDVDNEMDQQSLSAPEKLL
EDKEGNRYGDPQLRIRCYLEACVFIDDVTRAQSCLLSHHRQLSKRTHLSISTYNIVMRMW
AKRGSFNHIRRLFILIEEAGLKPNVSSYSAALECMGRMPECQTWIIKRCLQQMEVDGLSV
DDVFRQCVFKKDEREMVLRAVRVVHPEYQPSASKDQPVCSLPLVKQFYAEREGATYPKLD
FSLKELQDRFSLQLGMEKATTITIDSVEALKPVTENMAQMRELLAAQRKHWEKALLQTLK
EKKRVLSSNSQKSWSTCIYPYLCILDDQDYVNIMIQGLDKLSPSGESLLIMAEEMGNRVY
NLYSIRQKSHSQMIEKLGSIYNSYSELLANDTETNGMLPRECWASLEMQRCSGPSLLSDD
TLWPMVLMVQLGSFLVDLMVRELKIWSDILNPAQEKKLIPVLYHMYTFRSHHKIGFIKPH
PIVTQIQRVAMETKLTFDSYVMPMLCPPVPWTSPKSGAYLLTPTKLMRSTDGAIQHQLLL
EKSREEDLHAVLDSLNQLGSCPWKINKPLLDIIISIFNDKGNEKLCIPPPLSEAPEVPRF
NLHDPSYTQAEKAYMKREGVKAKKKVAEMHSLRMDALYKLSIANHMRDEIFWFPHNMDFR
GRTYPRPPYFNHLGSDVTRGLLLFAEGQPLGPKGLDWLKIHLVNLTGLKKRSSLAGRLEY
AESIMEDILDSADHPLDGRKWWMNADEPWQALACCMEIANASRSPDHTKFISYFPVHQDG
SCNGLQHYAALGRDVIGATSVNLMPCELPQDVYSGVAQQVEEFRARDAEKGLKIAQVLEG
FISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKDYIWDASHYLVKQVFSSLKEM
FTGTREIQEWLTESARLIAKSGRTVEWVTPLGLPIVQPYHRIKNQTLKSSMQNLSIHISH
DANEKPDSMKQKNAFPPNFIHSLDSTHMMLTSLHCYRAGLTFVSVHDCYWTHAVTVDIMN
RVCREQFVALHSQPILDELSGFLLKKYCSRPPVISKPKKFEEHYKMAQLLASVPQTGDFD
LEKVKESVYFFS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgagactgtgtgcctactctgctgctttaactcgcagttttgcggttgac
agaagtgttcagagatttctgaatggcgattattgccacctgtgtctcagaatacggagt
aacggagagagacagatacaagacaaaacatgggctacaatttaccaaagacactattca
gccattgctaagaaggaggatgggaagaaaagattctgtgaacagtctcaattgttggat
gttctggaggccagaatccaacagctgcaatccgacgccgttgtagacgtcaaacattca
aaggtgcaaatcatcaaaacgcagcagaaaataaagaaaacatcacctgggaatagtcaa
aagaacttgccaggagaaaaagcagaaatgcttaaaagtgggccgtctgcaaaaaaaggt
ggaactgaaggagtcatgccttccaaagctcacgcaagtcgctggatggagaaactcaag
cgcgaaaggtggattaatcccaaaaaacaaacttcacacagaacgcacgacaagcccgtt
gtgggtaaaaacagcaaagggagttcgatgcgtcctggtacatctacaaagaccatcaca
acaggcaaaataagtgagacaagaactaaaggagaagactccaagacctctgcgtctacc
acaacatcctccaaagtcgattctgtgcaaaaaaagtctaaaaagaaggtttcgagagtc
tcagaaagtttagccgtaaggttttcaggagtgcaaaagatctccagcagtgaggctggc
agtgtttctgagatgtctacacaagagaaactggcagataaagaatttgaagtggtagag
gagtttgatgtagacaatgaaatggaccagcagagcttgagtgctcctgaaaagcttctg
gaggataaggaaggaaaccgctatggagatcctcagctcagaatccgctgttacctggag
gcgtgtgttttcatcgatgatgtaactcgagctcagagctgcctgctgtctcatcatcga
cagttatccaaacgcacgcacttgtctatcagcacctacaacatcgtgatgaggatgtgg
gccaaaagaggttccttcaatcacattcgtcgcttgttcattctgattgaagaagcaggt
ctgaaacccaacgtttcgtcttacagtgctgctctggagtgtatgggccgcatgcctgag
tgccaaacatggatcataaaaaggtgtctgcagcagatggaagtggacggcctgtccgtg
gatgacgtgttcagacagtgtgtgtttaaaaaggatgaaagagaaatggttctgagggcc
gtccgtgtggtgcaccctgaataccaacccagtgcatccaaagatcagcctgtctgctcc
ctgccattggtgaaacagttttatgctgagagggaaggtgccacgtatcctaaactggac
ttcagcctgaaagaactgcaggaccggttcagtcttcagctgggtatggagaaggccact
accatcactattgactccgtggaggccttaaagcccgtcaccgaaaatatggcccaaatg
agagaattactagcagcgcagcgcaaacactgggagaaagctcttctccagacactgaaa
gaaaagaaacgggtattatccagcaacagccagaagtcctggagtacctgcatataccca
tacctgtgtatcctggacgatcaggattatgtgaacatcatgattcagggtttagacaaa
ctgtcacccagtggtgaatcgttgcttatcatggcggaggagatgggaaaccgtgtctac
aatttgtactccatccggcagaagagccacagtcagatgatcgagaagcttgggagtatc
tacaactcgtattctgagctcctggcgaacgacactgagaccaatggcatgctgccacgg
gagtgttgggcaagtcttgagatgcagaggtgcagcggtccctctcttttaagtgacgac
accctttggccgatggttctgatggtacagctgggcagcttcctggttgacctgatggtt
cgtgagctcaaaatttggagcgacatcctcaatcccgctcaagagaagaagctcatccct
gtcctttaccacatgtacacattccgcagccatcataagattggcttcatcaaaccgcat
cctatagtgacacaaatccagagggttgcgatggaaaccaaacttacatttgactcctac
gtcatgcccatgctgtgtccccccgttccctggacgtccccaaagagcggcgcatacctg
ctgacgccaaccaagctgatgcgctccaccgatggagccatccaacaccaacttctcctg
gagaagagccgagaggaggatctccatgccgttctggactctctcaatcagttgggcagc
tgcccctggaagatcaacaagcccttgttggacatcatcatctcaatcttcaacgacaaa
ggcaacgaaaagctctgcattcctccgccactgtccgaagcacccgaggttcctcgcttc
aaccttcacgacccgtcctacactcaggccgagaaggcctacatgaaacgggagggagtc
aaagccaagaagaaggtggcggagatgcacagcctccgaatggacgcgctgtataagttg
tccatcgccaaccacatgagggacgagatcttttggtttccacacaatatggacttccga
ggacgtacgtacccccggccgccttatttcaaccaccttggtagtgacgtgaccaggggg
ttgctgctgttcgcggagggacaacctctcgggcccaaaggcctcgactggttgaagatc
cacctggtgaacctcacagggttgaagaagcgtagctcactagctggacgcctggagtat
gccgagagtatcatggaggacatcctagactccgcagaccatcctcttgacggtcgcaaa
tggtggatgaatgcagatgagccgtggcaggcactggcttgctgtatggagatagcaaat
gcctcccgctcccccgaccacaccaaattcatctcttattttcctgttcatcaggacggt
tcgtgcaacggcctccagcactatgctgccctcgggcgggatgtgatcggtgctacttcg
gtgaacctcatgccctgtgaactgcctcaggatgtgtacagcggtgtagctcagcaggtg
gaagagttcagggctcgggatgcggagaagggtttgaagatcgcccaggtgctggagggc
ttcatcagcaggaaggtggtgaagcagacggtgatgactgtggtctatggcgtcacgcgc
tacgggggccgtctgcaaatcgaaaagcgactgaaggaaatcgatgatttccctaaggac
tacatatgggatgcttcacattacctggtgaagcaggtgttcagcagcttgaaggaaatg
ttcacagggacgagagaaattcaggaatggctgacggagagcgctaggctaatagctaag
tctgggaggacggtggaatgggtcacgccgctggggcttcctatcgttcagccctaccat
cgaataaagaaccaaacgctcaagagcagcatgcagaacctgagcatccatataagtcat
gatgccaatgagaaacctgacagcatgaagcagaaaaatgccttccctcctaattttatc
cactctctggactccactcacatgatgctgacatcactgcattgttacagggctggtctg
acgtttgtgtccgtccatgactgttattggacccatgctgtgacggtggacatcatgaac
agggtgtgtcgtgagcagtttgtggctctgcacagtcagcccattctagacgagctgtcg
gggtttcttctaaagaagtattgcagcaggccaccggttatatccaaaccaaagaagttt
gaagagcactataagatggcacagcttttggctagtgttcctcaaacaggtgattttgac
ctggagaaggtgaaagaatcggtgtatttctttagctga
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