Carassius gibelio (silver crucian carp): 127990524
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Entry
127990524 CDS
T08819
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127990524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127990524
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
127990524
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
127990524
NCBI-ProteinID:
XP_052447463
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All DBs
Position
A5:7080211..7088179
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AA seq
498 aa
AA seq
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MIAGVKRERDIDEDEEEEVRVKVGRSHGVEDRRSRHCPYLDTINRSVLDFDFEKLCSISL
SHINVYACLICGKYFQGRGQKSHAYIHSVQFAHHVFLNLHTLKFYCLPDNYEIIDSSLED
ITYVLKPTFTKQHIAGLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPP
LRNYFLEEENYGRIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KTFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPAEE
KEALLLKDEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNNEKE
YKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQ
VTEKVTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYI
QIWKRQDKDDVAEQHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagagacattgatgaagacgaagaggaagaggtgcgt
gtgaaagttggtcgctctcatggtgttgaagaccgaaggagccgccactgtccatatctg
gacacaatcaacaggagtgtcctggatttcgacttcgagaagctttgttcgatctcgctc
tcacatattaacgtctacgcctgtctgatctgcgggaaatacttccaaggtcgaggtcag
aagtctcacgcgtacatccacagcgttcagttcgcacaccacgtgttcctcaatctccac
acgttaaagttttactgcctgccggacaattacgagatcatcgactcctcattagaggac
attacgtatgtgctgaaacccacgttcaccaaacagcatatcgctggtctggataagcac
ggaaagctgtacagagcctacgatggcacgacatatctgccaggaattgtgggtctgaat
aatataaaggccaatgactatgctaatgtggttttgcaggctttgtcaaacgtgccgcct
ctgcggaactacttcctggaggaggagaactacggcaggatccgccggccgccgggtgac
atcatgtttctgttggtgcagcgcttcggggagctcatgcgcaagctctggaacccgcgt
aacttcaaagcacacgtgtcgccgcatgaaatgttgcaggccgtggtgttgtgcagcaaa
aagacctttcagatcactaaacaaggggacgctgttgactttctgtcctggtttctgaat
gcattgcatggtgctcttggtgggacaaagaagaaatcatccatcctcaccaaggtgttt
caggggtccatgcgaatcttctcaaagaagcttccccatccagatttgcctgcagaagag
aaagaagccctcctcctgaaggacgagtatcaggaggagatgtccgagtccaccttcctg
tacctgaccctggatctgcccaccgcacccctctacaaagatgagaaggagcagctcatc
attccccaggtccctctcttcaacatcctggccaagttcaacggaaacaacgagaaggag
tacaagacgtacaaggagaacttcctgaaaaggttccagctcaccaaacttcctccgtac
ctcatcttctgcatcaagcgcttcaccaagaacaacttctttgtggagaagaacccgact
attgtcaacttccccatcacgaacgttgatttgcgcgagtacctgacggaagaggcgcag
gtcacagagaaggtcaccacctacgacctggtggccaatgtagtccacgacgggaagccc
actgaaggatcctacaggattcatgtcctgcatcacggcacagggaagtggtacgagctt
caagacctgcaggtgatcgacatcctcccacagatgatcacgctctcagaggcttacata
cagatttggaagagacaagataaagacgatgtcgcagagcagcataccggggcgtag
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