Carassius gibelio (silver crucian carp): 127992986
Help
Entry
127992986 CDS
T08819
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127992986
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
127992986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
127992986
NCBI-ProteinID:
XP_052447648
LinkDB
All DBs
Position
A5:complement(10608880..10673923)
Genome browser
AA seq
2013 aa
AA seq
DB search
MIMTTAANWAANGASLEDCHSNLFSLAELTGIKWRCYSAGALAYGPGISAPAQDDPVLRS
FMQCVRANLLCVWRRKIKPDAKELWIFWWGEEPNLTDIIHRELEVVEEGLWECGLSYECR
TLLFKAIHNLLERCLMDKDFVRIGKWFVKPYKSEEKPLSSSEHLSCCFSFFLHGDSSVCT
SVEVSQHQPLYHVTEDHVHLAQSRSLQVVLSPYGLCGALTGRAFKMSDPAVRKLMEDWSH
FYPMVLKHREMDGEDGYLTFDPHSYVALEVIVGGVRMVYPEALVLVAQSDAPAQVLLRDS
SSCGTPLTPPTSPGRACSGDSGYQMTISSVSGQENAPNVSPKHSGRKLMNQMLHEAWREC
HVNPLQCNSSKSNSSLSVWGFTCPRERVPCGCSRLKPEQMSSISSYTGSIPPTSTQKHKS
VEKPDKPEKIPRRMSLTAFHHRMCVDPQLSSGPELSLMPLDATLQPLSDCKYSKSHSVTR
KAPESLVQSPVSPQPPTLSPHPRTGDPELTETPMAVPDCLEGQSGPMHVETSESVLYGMP
LGTKNDANKWWRRYKIPMADNMEFKPPDLCCDSEENRPQKEGAALKRLFKQMQKRLKISE
EHVRRDILPQAEVDDPGDDPYDFKEGDIEYSFPATKKLKGLSRDPDRKSKAEEVNGNSVV
PEGKDAMSIFSSAPKSEESNPDESDAKVNPPLTREKDLIVLISDLENIFGEEEDELTSTY
PNQQSAKSGSVAAEERPVGVEGRAPVPYPSTVAELQRMFPTPPSLEQHAAFSPIMMYRDT
PSQEPAGPAAAHDQPSCSQSNSQITDFKMDMEEEITEDVLPLIGCSMYAPLRSLPSQCLT
ALKIPEHCYYRPSWTDMNKMEQYCSTTQNPFSRDTYVSSALLEQDYASMTMSAAFTGTAT
GVLPSPSASRFSVPTPRTPRGMGAASGQGSVRQDGTELSSPASTPSTSVPLSSVEPSVSG
PPLPEAHSLYVTLLLSDSVLDIFKDRNFDSCCICACNMNVKGADVGVYIPDSTCEDQYRC
MCGFSAIVNRRLAHGAGLFLEDELDIFGRGSEAGQAAERRLALCRRDPTGRRAEEQQTPA
SVMALLQEQCSQPITSLTSLHKSPSCSCHGRQGALLQSWAADRLWVDSSDACVECYNALM
QGLQYVDNSAGGKVEQATVRSSALHTWPQTNVLDISKLSSQDVVRMLLSLQPFLQDAIQK
KRSGRSWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPSVLLGYDRDFLSLSPLA
LPFWEKFLLEPYGGQRDVAFLVLCPNYDALLSSAKAFFHELSAVYETCRLGKHRPLARVS
RDGIVPVGSVECKEETDDQWLSGLWAGQQEENLNKLKLYKQICRHTLGPQLSTLILDSGL
LLPPKPPPASDPLTPPASTQQPISADGDSNSGNTPNPACGAICQSSGAEPGQVVTGDSNT
TPSAESAESSAERDRIGIPTGAESADSHAHPPAIVLYVVDPFLCSGAGSESEDGGEDVDV
SSVWLLALLRCYTDMLSTLPESIQPALVLQVLPCQHLLQPASGESPEYLQHLRSLAFSTY
SQSRRLLPRQTHIRSLTGFGPASVVQSALKSPESPSVTRLYSPPFILGLTRSKQSEAGDV
CSDASSRCNVLFVGYCLSHDQRWILVSCTDQQGELLETCVINIDVPNRARRPKFSPRKIG
LQKLWEWCVGIIQMTSLQWRIVIGRLGRLGHGELKDWSVLLGEHSLHSISRQLREACLVC
GLSTADSPSILSACLVSMEPQGSFVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTH
ILVFPTSSTTQVAPSTYPAEDNPDDMFGLPFPDELESDIGHDDMMLLTGTLHPSPNTSPV
PSPGSPSCLGSGSHFQHTRSQGERLLSRDAPEELKQQPLALGYYVSTAPADSLPHWFWAS
CPQAQHQCPLFLKASLHHHISIAQTDDLVSGKTSSRVHPLDSKTTSDVLRFVLEQYNALS
WLTCSPAAQDRRSCLPIHFTVLTQMYNGILKLL
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgattatgactacagcagcgaactgggcggcgaacggggcgagtttagaagactgtcat
tccaacctcttctctctggccgagctgacgggcattaaatggcgctgctacagtgctggc
gctctggcgtatgggccagggatttccgctccagcgcaggacgacccggttctgcgcagc
ttcatgcagtgcgtccgtgcgaacctgctgtgtgtgtggaggcgcaagatcaaaccggat
gccaaagagctctggatcttctggtggggtgaagaaccgaacttgaccgatatcatccac
cgtgagctggaggtggtggaggagggattgtgggaatgtggcctgtcatatgagtgccgg
acactgcttttcaaggctattcacaatctgttggagagatgcttgatggataaagatttt
gttcgcattgggaagtggtttgtcaagccatacaagagtgaagagaaacccctcagtagc
agtgagcacctgtcgtgctgcttctcattcttcctgcatggcgacagcagcgtgtgcacc
agcgtggaagtttcacagcatcagccactgtatcatgtgacagaggatcacgtgcatctg
gcccagagccgctcattgcaggtggtgttgagtccgtatggcctgtgcggggcactgacg
ggtcgggcgtttaagatgagcgaccctgcagtgcggaaactcatggaggactggagtcat
ttctaccccatggtgctgaaacacagagagatggatggcgaggacggctacctgaccttt
gaccctcacagttatgttgcacttgaggtcatcgtaggaggagttcggatggtttaccca
gaagccctagttctggtggctcagagtgacgcacctgcgcaggtgttgctcagagattct
tccagctgtgggacacctctcacaccccccacctcaccgggaagggcctgctcaggagac
agtggctatcagatgaccatctccagtgtgtctggtcaagagaatgctccaaacgtcagc
ccaaagcattctgggaggaagctgatgaatcagatgctccatgaggcctggagggaatgt
cacgtcaaccctcttcagtgcaacagcagtaagtctaacagcagtctatctgtgtgggga
ttcacctgcccaagagagcgagtcccttgtggctgctccaggttgaagccggagcagatg
agcagcataagttcatacaccggctccatccctccaacctccacccaaaaacacaagtca
gtcgaaaagcctgataaacccgagaagatccccagacgtatgtctttgaccgccttccac
caccgcatgtgtgtggatccgcaactctcctctgggccggagctcagcctgatgcctttg
gatgctactctccagcctctgtccgactgcaaatactccaaatctcactccgtcactaga
aaagcccctgagtctcttgttcaatctcctgtatcaccacagccacccacgctgagcccc
catccgcggacaggggaccccgagctgacggagacccctatggctgtcccagactgtctg
gaggggcagtcaggacccatgcatgtggagaccagtgaaagtgtgctgtacgggatgcct
ctaggaacaaagaacgatgccaacaaatggtggagaaggtacaagattcccatggcagat
aatatggagtttaaacctccggatctttgctgcgactcagaggagaaccggccacagaag
gaaggagccgcccttaaaaggctgttcaagcagatgcagaagaggttaaagatctcagaa
gagcatgtgaggagagacatactgccacaggctgaagtggacgatcctggcgatgatcca
tatgacttcaaagagggagacattgagtacagcttccctgccaccaaaaagctgaaagga
ctgagccgagacccagaccgcaaatctaaggcagaggaagtgaatggtaacagcgtggtt
cctgaggggaaagacgccatgtccatctttagttcagccccaaagtcagaagagtcaaat
ccagatgaatcagatgccaaagtaaaccctccattgaccagagagaaggatctcattgtg
ctcatctctgacctggagaatatctttggggaggaggaagatgaactaacgagcacatat
ccgaaccaacagtcagccaagtccgggtctgtggcagcagaggagcggccagtaggggtc
gaggggagagctccagtgccgtatccctcaacagtagcagagctccagcgcatgttcccc
acacctccgtctctagagcagcacgccgccttctctcccattatgatgtatcgcgacacc
cccagtcaagagccggccggtcccgcagcagctcatgatcagcccagctgctctcaatcc
aacagccagatcacagacttcaaaatggacatggaggaagaaatcacagaggatgtactt
ccgctgattggttgctccatgtatgccccactgcgttccttacccagccagtgtttgact
gctcttaaaatccctgagcactgctactacagaccatcctggacagatatgaacaagatg
gagcagtactgctcgactactcagaatcccttcagcagagacacatacgtcagcagtgct
cttctggagcaggactacgcctccatgaccatgagtgctgccttcactggaactgccaca
ggcgtcctaccctccccgtccgcctctcgcttctctgtgccgacccctcgaaccccacgt
ggcatgggtgcagccagtggccagggctccgtcaggcaggacggcactgaactcagctca
ccagcatcaaccccctccaccagcgtgccactcagctcagtcgagccatctgtatcggga
ccaccgctgcctgaggcgcacagtctctatgttacactgctgctgtccgattcagtcctg
gatattttcaaagaccgcaactttgacagctgctgcatctgtgcctgtaacatgaatgtt
aaaggggcagatgttggtgtctatatcccagactccacctgtgaggaccaataccgttgc
atgtgcggcttcagcgcgattgtaaaccgaaggctggcgcacggggcaggcctcttcctg
gaggatgagctggacatatttggccgtggctctgaggcgggccaggcagcagagaggaga
ctggcactgtgtagacgagaccctaccggccgaagagctgaggagcaacagacgcctgcc
tcagtgatggctctgttacaagagcagtgctctcagccaatcacatccttgacctccctg
cacaaatcacccagctgttcctgtcacggccgccagggggcactattgcagagctgggca
gcagacaggctgtgggtggacagcagtgatgcgtgtgtggagtgttataatgcattgatg
cagggactgcagtatgtggacaactcagctggaggaaaggtggaacaggctacagtgagg
agcagtgcactgcacacctggccacagactaatgtgttggacatcagcaagctgtcctct
caggatgtggtacggatgctgctgtccctccagccattcctgcaggatgcgatccagaag
aagaggtcaggcaggagttgggagaatatccagcatgttcagggtcctctcacatggcag
cagttccacaagatggctggacgaggttcttatggttcggaggaatccccagagcctttg
cctatccccagcgtgctactgggatatgatcgagattttctgtctctgtctccgcttgca
cttcccttctgggagaagtttctgctggagccatatggaggtcagagggatgtggccttc
ctggtactgtgtcctaattatgacgccctgctcagcagtgccaaagcgttcttccatgag
ctcagtgctgtctatgagacgtgtcgactggggaaacaccgtccactagcacgggtgtcc
agagatgggattgtcccagtgggatcagtggagtgtaaggaggagacagatgatcagtgg
ctctcagggctctgggctggacaacaggaggaaaacctcaacaaactcaaactctacaaa
caaatctgcagacacacactcgggccgcagctctccaccctgattctggacagtggcctc
ctcctcccaccaaagcctccacctgcttctgatcctctcaccccgccagcatccacccaa
cagcctatatccgctgatggagacagcaactcaggaaacacccctaaccccgcctgcggt
gccatatgccagtccagcggcgcagaaccgggacaggtagttacgggcgactcaaacacc
actccatcagcagagagtgccgagagctcagcagagagggaccggattggcattcctaca
ggggcggagtcagcagacagccacgcccacccaccagccatcgtgctttatgtggtggat
cccttcctgtgctcaggggcggggtcagaaagtgaagatggcggggaggacgtggatgtg
agcagcgtgtggcttttagcactgctgcgctgttacacagatatgctgagtacgctgcca
gagagcattcagcctgcactagtgctacaggtgttgccgtgtcagcatctgttgcagccg
gccagcggagagagtcctgagtacctgcagcacctgcgatcgctggctttttccacatac
tcacagagtcgccgtctgttacccagacagacgcacatcaggtccctcactggattcggc
ccagcgtccgtcgtacagtcagcgctcaagagcccagagagccccagtgtcacgcgtctg
tattctccgcccttcatcctgggtctgacccgcagtaaacagtctgaggcgggtgacgtg
tgttcagacgcttcctcgcgctgtaatgtgctgttcgtgggatactgtctgtcacatgac
cagcgctggatcctggtgtcctgcacagatcagcagggggagctcctggagacctgcgtc
atcaacattgacgtgcccaacagagcccggcggcccaagttttctcctcgtaaaattggc
ctccagaagttatgggaatggtgcgtgggcattattcagatgacatcattacaatggagg
atcgtgattggccgtttgggaagactgggccacggggaactgaaagactggagtgtgctg
ctgggcgagcattcactgcattctattagccgtcagctgcgggaggcgtgtcttgtgtgt
ggtttgtccactgctgattcgccctccattctcagtgcctgcctggtttccatggagccg
cagggatcttttgtggtgatgccagatgcggttacgatgggctcagtgttcggccgcagc
accgcgctcaacctgcagacgtctcagctcaacactcctcaggatgcgtcctgcacgcac
atcctggtgtttcccacctcctccaccacacaggtggcacccagcacttaccctgccgaa
gacaaccccgatgacatgtttggcttgcctttccccgatgagctggagagtgacatcggc
catgatgacatgatgctgctgacagggacactgcatccgtcacccaacacgtcccctgtc
ccgtctcctggatcaccatcttgcctgggctctggatcacacttccagcacacacggagt
cagggtgagcgccttctgtcccgggacgctccagaagagctgaagcagcagccgctggct
ctgggatactacgtgtccacagctccggctgatagcctaccgcactggttctgggcgtcc
tgcccacaagcacagcatcagtgtccgctcttcctcaaggcatctctgcatcatcacata
tccatcgctcagacagatgatctggtgtctggtaagacgtcttcaagggttcacccgctg
gactccaaaaccacctcagatgtgctcaggtttgttttggagcagtataacgctctttcc
tggctcacctgcagtcctgctgctcaagaccggcgctcctgccttcccattcatttcacc
gtcctcacgcagatgtacaacggcatcctcaagctcctgtag
DBGET
integrated database retrieval system
