Carassius gibelio (silver crucian carp): 127995168
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Entry
127995168 CDS
T08819
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04270
Vascular smooth muscle contraction
cgib04625
C-type lectin receptor signaling pathway
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127995168
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127995168
09153 Circulatory system
04270 Vascular smooth muscle contraction
127995168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127995168
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127995168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127995168
NCBI-ProteinID:
XP_052447815
LinkDB
All DBs
Position
A5:complement(13155187..13213463)
Genome browser
AA seq
1438 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPSSHEFDPTELPVQSVVSDR
RPESCGLVQRCVIIQRDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTL
VTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTIPHSPGPIGPD
RSSSSPSPSERKLNPLPVWAMTEEQSRNPTTKLLKEIQDAKKHIPQHQEQLSKPTGIGQD
GSLSPRPREGEQEDGGRDSDRPPSWQGDAGLEPPWTNNTTTPVTPSPVPESPCQRETPCH
SPKTTPRDSLNSCPSPDAEDTPDLDSQSSVGTPTSRPVAHIIGAEDEDFDTEQEQMNGQC
SCFQSIDFLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFFID
KTASLKVTVPESIISDLERTAHSVNVERKRPEPNSEDVHRQYVQQLQDTLLPDIQKNLED
FRHKRSMGLTLAEAELTRLDTERIRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCS
TMQFVILSYMKQLGVKVKHKPKLMNLFPKKKTKKPEKDGNEEKSKKTRFPNVFPQRRPSR
IDPSSLSKALEPRQRPTKPQLPLGAGEQADGSSPPVRGSQSSEGPDGTATLVTLPPNSAP
AAQGTDSFSRESETGGPPFSALPRLGDSVIPGESQDSSSSNTHFDFSPCTLEHLQEEEAE
TEKTQETGTPRSDKSRMEPLGSGEVQSEDDQCVEVELETPNWQTLVSRDVLSTLTNHEIK
RQEVINELFYTERAHVRMMKVLENVFYQPLIREAILPPADIKNIFSNLEEIVQLHVSLTE
QMTAVRKKNETALIDSIGDDLLSWFSGEEEEKIKRAAGTYCSNQPFALELIKSKQKKDQR
FNSFILEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEERRKVKQAGECC
RNILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHDGPLS
WKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMV
RSVATDNRSFFVISMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLLNIIPLPQT
DGEREAVELMNSGVQKLNKDSEPISLVSIQPPEKDCTEVMPTPPCSTNPFETKSDEEDEE
ENSLQDQAEDDEAFEAADVTDRLIFLKQRSRLGIAIDEDEAEAFELQPLRADEALRTLAT
LRQLLINHMSSQEDTDRDGERREQQEDVARTGSQQGSEDSTAISSTVANGSDRAENAQEL
PSGDTGFFETSEDCVSAGSYMVLEVCGGSGESSTDDEVQGSSGEPVAGGDSGIDLKKLLS
SSSQSSRGPNLNRRIMTHIRLLQADLQHLKDTEIKYNQLRQRLSEETATDTEENKDKS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggaccatcccccagacaaaaaacccaaaagcgacaaggcgtcagtc
ccctcctcgcatgagtttgaccccacagaactgcctgttcaaagtgtagtatccgacaga
aggccagagtcctgcgggcttgtgcagcgttgtgttatcatccagagagatgagaatggc
tttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgtaaaagaggatgga
gctgccatgcgagctggtgttcagacaggcgaccggatcataaaggtcaatgggacatta
gttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggctcctacgtggcc
ctaactgtgctggggagaccgccgggtttgcctcagatccccctctcagacggcgagggg
gaggaggggcctctcttctcgctcaccatccctcactccccggggcccatcggtccagac
cgctcgtcttcctcccccagcccctcggagcgcaaactcaaccctcttcctgtatgggcc
atgacggaggagcagagcaggaaccctacaactaaactactgaaggaaatccaggacgcc
aagaagcacattccacagcaccaggagcagctcagcaagcccactgggattggacaggat
ggctccttatctccaaggccacgagaaggagagcaggaggatggagggcgagattcggat
cggcccccttcctggcagggtgatgctggattggagccaccatggaccaacaataccaca
acccctgtcactcccagtcctgtcccagagagcccatgccaaagagagaccccctgccac
agcccaaagaccaccccccgagacagcctcaactcctgtccttcaccggacgctgaagac
acacctgaccttgattctcagtcgagtgtggggacccccacctctcgtccggtagcacac
atcattggtgctgaagatgaagactttgacacagagcaggaacagatgaatggccagtgt
agctgttttcagagcatagactttctgaagtctcggcctgctcacctggcagctttcatc
catcacgtggtctctcagtttgaccctgcgcctctgctgtgctacctctatgctgaactt
tacaaacagaccagctccaaagagacacgacgaatcctcatggataccttcttcatagac
aaaacagctagcttgaaagtaacagtgcctgaatccatcatctctgacctggaacgtact
gcacactcagtaaatgtggaacggaagaggccggaaccaaactcagaggatgtccaccga
cagtatgtgcagcaactgcaggacacacttctgcctgacatccagaagaacctagaagac
ttcaggcacaagcgcagtatgggtttgaccctagctgaagcggagctaacccgtctggat
acagagagaataagagaccgtgtggctctggaaaaagagcgatcctgtgcagagcacatc
atctctaagatagaagatgtactattgacgtcacaggccacagaggaagacaagtgtagc
accatgcagtttgtgatactgtcgtatatgaagcagctcggtgtaaaagtgaagcacaag
cccaagctaatgaatcttttccctaagaaaaaaacgaagaagcctgagaaagatggaaat
gaggagaaatcgaagaaaacaagatttccaaatgtttttcctcagagaaggccgagcagg
attgacccttcatcactcagcaaggctctggagccgaggcagcgtccgacgaagcctcag
ctgccattgggcgctggagagcaggcagacgggtcgtctcctcccgtacggggcagtcag
tccagtgagggcccagatggcaccgctaccctggtcacgttaccccctaacagcgctccg
gcagcacagggcacagacagcttcagccgagagtcggagactggtggacctcccttttct
gcacttcccagactgggagacagtgtcatcccgggagaatcgcaggactcgtcctcttca
aacactcactttgacttcagcccctgtacactggagcatctacaggaggaggaagctgag
acagaaaagacgcaggagaccggcacccccaggtctgacaagagcaggatggagccgctg
ggctctggagaggtgcagagcgaagatgatcagtgtgttgaggtggagctagagactcct
aactggcagacgctggtgagcagagacgtcctgtccacacttaccaatcacgaaatcaag
agacaggaagtcatcaacgagttgttctacacagagagagcacacgttcgaatgatgaag
gttctggaaaatgtgttttaccagccgctgatcagagaggccatcctgcctcctgcagac
atcaaaaacatcttcagcaaccttgaggagatcgttcagctgcacgtgtctttaacggaa
caaatgactgcagttcggaagaaaaatgagactgcgctcattgactcaattggagatgat
ctgctctcctggttcagtggggaagaggaggagaagatcaaaagagctgcaggcacgtac
tgcagtaatcagcctttcgccctggaactcatcaagagcaaacagaagaaagaccagcgc
ttcaactccttcatactggaggcggagagtaaccgtcattgtcgcaggctgcagctgaag
gacattattcctgtggagactcaaagactcacaaagtatcccctgctcctggaaaacatc
gccaaatacacagaggatcctgaggagagaaggaaagtgaaacaggctggcgaatgctgc
cgaaatattctgactcacgtcaaccaggaggtgaaggaagctgagaacaaacagaggctg
gaggactaccagagacgactggacctgtcctcactgaaacagagcgagaaccccatgatc
gccgagtttaagaacctggacttgactaagaggaagatggtgcatgatggaccgctgtcc
tggaaggtcaacaaagacaaaacgattgagctgtacacattgctgctggaggatatattg
gtgctacttcaaagacaagatgagaagctaatcttaaaatgccacagtaagaatctggcg
ggcaccgctgagaccaaacacatcttcagccccatcatcaaactcagcactgtgatggtg
cgctccgtcgccaccgacaacaggtcattctttgtgatctctatgtctgataatggagcc
cagatctatgaactaatggcccagactgtgtctgagcaaaagacgtggcagtgtctgata
acacaaagagcagattgcatgaagaccaaactactcaacatcattccactgcctcagact
gatggggaacgggaagcggtcgagttgatgaactctggtgttcagaaactaaacaaagac
tctgagcctatttctttagtgagcattcagcctccagaaaaagattgcactgaggtcatg
ccgaccccaccatgtagcaccaacccatttgagaccaaatctgatgaggaggatgaagaa
gaaaattcactacaggatcaagctgaggatgatgaagcgttcgaggcggccgatgtgacc
gatcgcctgatattcctgaagcagcgctcgaggctgggcatcgccatagacgaggacgag
gccgaggcctttgagctccagccactcagagctgacgaagctctcagaacactggcaact
ttgaggcagctcctgatcaaccatatgtccagtcaggaggacacagacagagatggtgaa
agacgagagcagcaggaagatgtggctaggactggctctcagcagggatcagaggacagc
actgcgatcagctccactgttgcgaacggctcagacagggccgagaacgcacaggaactg
ccctccggagacacaggcttctttgagacgtctgaggattgtgtctccgcaggcagttac
atggtgctggaggtgtgtggcggctcaggcgagagcagcacagatgatgaggtgcagggc
agcagcggggagccagtggccgggggagactcaggcattgacttgaagaagctcctgtct
tcctcctctcagagcagcagaggaccaaacctcaacagacggatcatgacacacatacgt
ctactacaggccgacctgcagcatctgaaggatacagaaatcaagtataatcagctacgc
caaaggctttcagaggaaacagctactgacacagaggaaaacaaagataaaagttag
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integrated database retrieval system
