Carassius gibelio (silver crucian carp): 127995914
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Entry
127995914 CDS
T08819
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127995914
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127995914
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
127995914
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127995914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
Zeta_toxin
AAA_18
SRP54
Motif
Other DBs
NCBI-GeneID:
127995914
NCBI-ProteinID:
XP_052447867
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All DBs
Position
A5:14526773..14548579
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AA seq
918 aa
AA seq
DB search
MSGLNVKKLKVNELKEELQRRGLDTRGLKADLADRLQAALEAEAAGSAPSDEQEPDCEAG
EEPGQGNDQQEEEEFAAREQDYGEEAKAQSDDGNSTDLCQGGFDDQGTESNEGNEDSTET
PIPGFGASDFSSDAMSGQMMEQNSNDQDEYQEPEAKQPFHEEPAKQHYKQDEVKQEYEET
PSHADQREQKLDEPASRQIPEGDSSQSSQQEESESSEVKTECKADEDVPQQAEQGSDGDV
QAKSEDDRHSSNSRKRSYDDSRGHGYYEHREERRGRSPQPPAEEEEEEIDDKLVVIDTYN
CDLHFKVARDRYSGYPLTIEGFAYLWAGARATYGVTKGRVCFEMKINEEISVKHLPASEP
DPHVVRIGWSLDSCNTQLGEEPFSFGYGGTGKKSSNCKFEDYGEKFSENDIIGCYIDFES
SEGVEMAFSKNGKLLGPCFHVTQEELASRALFPHVLVKNCAVEFNFGQREEAFFPQPEGY
TFIQDIHLEDRVRGSLGPATKTDCEILMMVGLPGSGKTTWAIKHAQENPEKKYNILGTNA
IMEKMKVMGLRRQRNYAGRWDILIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRK
MRPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANFVLPEVGEFLDEV
TFVELQREEAGVLIKQYNEEGRKAGPPPEKRFDSRQGGFRGRSNFQRYDNRSGPQGGRGG
YQNRGGSGGGGYRGVDGNHSANSLGYNRGGYNQNRWGNGYRDGGSGSRGGYNRSQPSGGS
YNHNRQGSYNKSGSGSTASYSQSQPQSYNQGYNQGYNQSNYNQGYNYGNYSQYPGYNQSY
SQTPAPAVQTYSQPQQPQPQQQQQPQQSYNQQYQQYAQQWQQYYQNQSQWNQYYNQYGNY
GNYTQQGTQGSQGAQGTQ
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcttaatgtcaaaaagctcaaagtgaatgagctgaaagaagagctccagcgg
cgtggcctggacacccgcggactgaaggcggatctggcggacagactgcaggcggcgctg
gaggccgaggcggcgggatctgcgccatcggacgagcaggaaccggactgtgaggctggc
gaggagccgggacagggcaatgatcaacaggaggaggaagaatttgcagccagggagcaa
gattatggagaagaggccaaggcacagtctgacgatggaaacagcacagacctctgccag
ggtggatttgatgatcagggaaccgagagtaacgaaggcaatgaggacagcacagagacc
cccatacctggttttggagcaagtgatttttcatcagacgcaatgtcaggacagatgatg
gagcagaactccaatgaccaggatgaataccaggagcctgaggccaagcagccgttccat
gaggaaccagccaagcagcactataagcaggatgaggtgaagcaggagtatgaggagact
ccttcacatgcagaccagcgggagcagaagcttgacgagccagcgtcacggcagatccca
gagggagactcaagtcaaagcagccagcaggaagaatctgagagtagtgaggtgaagact
gagtgtaaggccgacgaggatgttccacagcaggccgagcagggcagtgacggggacgtt
caggccaaatcagaggatgatagacactcatcaaacagtcgcaagaggtcttatgatgat
agtcgaggacatggttactatgaacatcgtgaggaaaggaggggaaggtcaccacagccc
ccagctgaagaagaagaggaagagattgatgataaacttgtggtcattgacacctataac
tgtgacctgcacttcaaagtggcccgtgaccgatacagcggttaccctttgaccattgag
ggttttgcctacctgtgggcaggggctcgagccacttacggtgttaccaaaggacgtgtg
tgctttgaaatgaagataaatgaggaaatttcagtaaagcaccttcctgcctctgagcct
gaccctcatgtggtgagaatcggatggtccctggattcttgcaacactcaacttggtgaa
gaacccttctcttttggctatggaggaactggcaagaaatcttccaactgtaaatttgag
gactatggggaaaagttcagtgaaaatgatatcattggctgctatattgactttgaaagc
agtgagggagtagaaatggcgttctccaagaatggcaagttgcttggcccgtgtttccat
gtcactcaagaagaactggccagccgtgctctgttcccacacgtgttggtgaagaactgc
gctgtggaattcaactttggacagagagaggaggccttcttccctcagcctgagggatac
accttcattcaggatattcacctagaggacagagtcagagggtcactgggaccggccacc
aaaactgattgcgagatcctgatgatggttggtttacctggtagtggaaaaaccacctgg
gccataaaacatgctcaagaaaaccctgaaaagaagtacaacatcctgggcacaaatgct
atcatggaaaaaatgaaggtcatgggacttcgtcgtcagcgcaactatgccggacgctgg
gacatccttattcagcaggccacgcagtgtctcaacaggctcatccagattgctgcccgc
aagaaacgcaactacatcctggatcagacaaatgtatatggatcagcccagagacgaaaa
atgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacggatgaggat
ttaaaagagcgaacattaaagcgaactgatgaggaagggaaggatgttcccgatcatgct
gtgttagaaatgaaagcaaactttgtgctgcccgaagtcggcgagttcctggacgaggtg
acgttcgtagagcttcagcgggaagaagccggcgtcctcatcaagcaatataacgaagaa
ggccgtaaagctggccctcccccggagaagcgctttgatagccgccagggtggttttcgt
ggtcgtagtaacttccagcgctatgacaatcgtagcggacctcagggtggtagaggtgga
taccagaaccggggcggctctggaggtggaggctaccgaggagttgatggtaatcactcg
gcaaattcattaggatacaaccgtggaggctacaaccagaatcgctggggaaatggctac
agggatggaggctcaggcagccgcggtggatacaaccgcagccagccgtctggaggcagc
tacaaccacaaccgccagggctcctacaacaagagtggctctggatcaactgcaagctac
agccagtcacagcctcagtcttacaatcaaggctataatcaaggctacaaccagagcaac
tacaaccaaggatacaactatggcaactacagtcaatacccaggatacaaccagagctac
agtcaaactccagcgccggcggtacagacctacagccagccacagcagccgcaaccacaa
caacagcagcagccgcagcagagctacaatcaacagtaccagcagtatgctcagcagtgg
cagcagtactaccagaaccagagtcagtggaaccagtactataaccaatacggcaattac
ggcaactacacccagcagggcacccaaggcagccagggcgcccagggaacacagtag
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