Carassius gibelio (silver crucian carp): 127996020
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Entry
127996020 CDS
T08819
Name
(RefSeq) uncharacterized protein LOC127996020 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127996020
04121 Ubiquitin system [BR:
cgib04121
]
127996020
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127996020
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127996020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
127996020
NCBI-ProteinID:
XP_052447874
LinkDB
All DBs
Position
A5:14595502..14602208
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AA seq
976 aa
AA seq
DB search
MANMKQEEPEINVKTQPRHCSIAWKYYIKNESNATVYCRLCKKNFKFSSNTANMIKHLRV
KHRLNISSVANGGERQCTEEPNEGSVAMDLPPQRHPGSHSNPTLRRRMQRFLPFSVRRTS
KVWNHYTQLSLHRVECNHCKRQLSFHNSTTSMREHLGRKHSIREGAVPPHNTTGIPSPAA
LHSHIQTSLRSNRCHTTGNAPFQPALPVTVKEEQEEVLPAEMAETNPARTTYTPDCVAGS
GTSSSNAIVHQDTDIGCLMYNFPVGEIGSTAGGSSNRSGSRACSNKRAEVLTDLILEMVF
RDLRPLSVVEERGFKLLLSCLEPSYPVPSPSLLGSLLWHRYHILKQCLQQYLQTSLTSHC
LTLCTEYWRSIDGCGVDGDGQYYLTVSTHFVDSNWRLARYVLETRPIAEFKRSPSKSGQT
SFADTLRAVLSEFQLPENFIFCVVHDTPSGSEPRGQENMAINPGCQQEFAGPSHAPPSNL
PEGWAPLLCAGQALKLCVQEGLCVETVRQALADARAIVLHFQHNVNASMALSQKAKAVNK
ESTCLVLNDPGRWTTAIEMCESLLELKWVISSVLEEKNVATNLADHQWRLIHELVPVLKT
VRIAASFLSEDINSPISALMPCLQGVSRLLGQKISECTCPVVKGVMQRIRAGMDKRWSLS
DEDALLDSSAVLSSFLDPRFKELRFLSPHARSKLHDKVKELLSVHAFTSDKQMNPERRQS
MEMEETVDEREEPAAFGLDDSLPIPAMASLDSPESCGSVEEGDSIELHPSEPSVVILSPE
PVNENTLGSPFKNANDRKRRSCGTSMTSPLRGDLQITPRIQMSPLPQSMYDIILGEDPTE
RMPEIHQQLENYIAEPLCRRSLSPLQWWRNKEHRFPAVARLARKYLSIPATAVSADRTFA
PRESPVTQRRATLGSKHLDHILFLHQNTDYVDQLKGDSSTREIEQWNSVSGNQSRESLYQ
ALVSYESNACVSEEES
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatgaagcaagaggagccagaaatcaacgtgaaaacacagccccgacattgc
tctatagcctggaagtactacatcaaaaatgagagcaatgccaccgtttactgcaggctg
tgtaagaagaactttaagttctcttcaaatacagcaaacatgattaaacacctcagagtg
aaacatcgactcaacatctccagtgtagccaacggcggggaaagacaatgcactgaagag
cccaacgaaggcagcgtggccatggatctcccacctcaaaggcatcctggaagtcacagc
aatccaactcttcgtcggagaatgcagcgttttttgccattttctgttcgccgcacatcg
aaagtgtggaaccactacactcagttaagtctgcatcgtgtcgagtgtaaccattgtaag
agacagctttcctttcacaacagcactacttccatgagagaacacttaggacgcaaacac
agcattcgagaaggagcagtacctcctcacaacacaacaggcatccccagtcctgcagct
ttgcattctcacattcagacctctttacgtagtaatagatgccacaccacaggcaatgct
ccgtttcaaccagcactgccagttactgtcaaagaggagcaggaagaagtactgccagct
gagatggcagagaccaatccagctcggaccacatacacccctgactgtgtagcaggaagc
ggtacttctagttcaaatgccattgtgcaccaagatacagatataggttgcctaatgtat
aattttcctgtaggcgagataggcagcactgctggaggcagcagtaaccgcagcgggtca
agagcctgcagcaacaagcgagcagaggttttgaccgatcttatcttggaaatggtcttc
agagaccttcggccattgtctgtggtagaagagagggggttcaaactcttactgagttgt
ctagagcctagctaccccgtgccttctccatctctacttggcagtcttctttggcatcgc
taccacatcctcaagcaatgccttcaacagtatctacagacaagtctaacttctcactgt
ctgaccctctgcactgaatattggcgatccatagatgggtgtggtgttgatggggatggt
cagtactaccttacagtcagcacgcattttgtagactctaattggcgcctggcacgttac
gtgcttgagacccgtccaatagcagaattcaaaagaagcccatctaaaagtgggcaaacg
agctttgcagacactttgagagcagtcctctccgagttccagctcccagagaacttcatt
ttctgtgttgtgcatgacacccccagtggatctgagcccagggggcaggagaatatggcc
attaatccgggatgtcagcaagaatttgctggacccagccatgctcctcccagtaatctt
cccgagggatgggcacctctgctttgtgcagggcaggccctgaaactttgtgtccaggag
ggactttgtgtggagactgtcagacaagctctggcagatgcccgtgccattgttctacat
ttccagcacaatgtgaacgcttctatggcactgagccagaaagccaaggctgttaataaa
gagtccacatgccttgtcttgaatgacccagggcgctggaccactgccattgagatgtgt
gagagtctgctggagctcaagtgggtaataagttctgtcctagaggagaaaaatgtagca
acaaatctggcagatcaccagtggcgtcttatacatgaactagttcctgtgctcaaaaca
gttcgcattgcagcatcgtttttaagtgaggacatcaacagtcccatttcagcattaatg
ccatgcctacaaggagtgtctcggctccttggacagaaaatttcagagtgtacctgtcca
gtggtgaagggagttatgcagagaattcgtgctggtatggacaaacggtggagtttgagt
gatgaagatgctcttctggattcttctgctgtattgtcctcgtttctggatccgcgtttt
aaagagttgcggtttcttagcccacatgcccgcagcaagttgcacgacaaggtgaaagag
ttgctatctgttcatgcttttacgagcgacaaacaaatgaatccagaaaggagacaaagc
atggaaatggaagagactgtggacgagcgtgaagaacctgcagcttttggattggatgat
tccttgccaattcctgcaatggcttctttggattctcctgaatcatgtggatctgtggag
gaaggtgacagcattgagctgcacccaagcgagccctctgttgtcatattatctccagaa
ccagtcaatgaaaacacgcttggttcgcctttcaagaatgctaacgaccgtaaaagacgt
tcttgtgggaccagtatgacctcaccgctgagaggagatttacagatcacgcctcgtata
cagatgagtcctctcccgcagagcatgtatgatattattctgggcgaggatcctactgag
cgaatgcccgagattcaccaacagctggagaactacatagcagagccactttgcagacgc
agcctctcgcccctgcaatggtggcgcaacaaggagcatcgctttcctgctgtggccaga
ctggctcgaaaatacctgtccatacctgcaactgctgtttctgctgatcggacatttgcc
cctagggagtccccagtgacccaaagaagggccacattggggtctaaacaccttgaccac
attttgtttctccatcagaacactgactatgtggatcagctgaaaggtgactcctccaca
cgtgaaattgagcagtggaacagcgttagtggaaaccaaagcagagaaagtctttaccag
gctctagtatcgtatgaaagtaacgcttgtgtgtccgaagaagagtcatga
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