Carassius gibelio (silver crucian carp): 127997567
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Entry
127997567 CDS
T08819
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127997567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_5
Ank_4
Ank_3
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
127997567
NCBI-ProteinID:
XP_052447995
LinkDB
All DBs
Position
A5:complement(16171644..16215971)
Genome browser
AA seq
2493 aa
AA seq
DB search
MHLFLVKLILQISLLTWTQGLECSEKCQNGGTCEPTGDGRGECRCPESFAGTACQFPNLC
LQSPCRNGGVCHLITSVNKVDFVCNCSLGYTDRLCLTPTNNVCLSSPCRNGGTCELTSIH
TYKCKCPPGWSGKTCHQADPCASNPCANGGKCSPFDSDYICHCTPFFSGQTCKQDVNECA
QSPSPCKNGGLCENEVGTYRCSCPAEYTGRHCETLYQPCNPSPCYHGGTCVQKGETSYEC
SCLPGFSGQNCEENIDDCPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMP
NSCQNGGTCLNTQGGYNCVCVNGWTGDDCSENINDCADAACHAGATCHDRVASFLCECPH
GRTGLLCHLNDACISNPCQKGSNCDTNPVNGKAICTCPLGYVGLACDQDVDECSLGANPC
EHAGKCINTKGSFQCKCLLGYVGARCELDINECMSNPCQNDATCLDQIGGFHCICMPGYE
GVFCQINTDECASMPCLNNGKCIDKINNYQCECPTGFSGSQCQFDIDECASTPCKNGAKC
IDGPNMYTCQCSEGYTGQHCETDVDECLSNPCHYGTCKDGLASFTCLCRAGFMGRLCEIN
INECLSQPCQNGGTCQDRENAYLCICPKGTSGANCEVNLDDCKSNPCDFGRCIDKINGYE
CACEPGYTGKMCNINIDECAINPCHNGGTCVDGVNGFTCLCREGYHDTTCQSQLNECLSN
PCIHGHCEDKVNGYNCICDSGWSGVNCDINNNECESNPCMNGGTCKDMTSGYVCTCRAGF
SGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPKPCKNGGV
CKESEDYESFSCVCPEGWQGQTCEVDINECVKNPCRNEAVCQNSVGSYKCSCKSGYTGRN
CETDTDDCTPNPCSNGGFCKDAVNAFTCTCLPGFRGSKCEEDINECNSNPCKNGANCTDC
VNSYICTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINSFSCLCPAGFTGNYCQHDIN
ECDSRPCMNGGTCQDSYGTYKCTCPQGYHGLNCQELVNWCKPSPCKNGGICRQSGTRYSC
QCQTGWTGLYCDVPSVSCEVAAKQQGVEVARLCRNSGQCLDAGNTHYCHCQAGYTGSYCE
EQVDECIPNPCQNGATCTDYLGGYSCGCVPGYHGVNCSDEINECLSQPCQNGGTCIDLIN
TYKCSCPRGTQGVHCEINIDDCTPFTDPITQEPKCFNQGRCVDRVGGYHCICPAGYVGER
CEGDVNECLSNPCDPRGTHSCIQLKNNYRCDCRTGYTGQHCDKVFDGCKGKPCRNGGTCA
VASNTPHGFICKCPPGFTGSTCEYNAHACGSLHCKNGGTCISGHKSPKCLCTPAFTGPEC
QYPTDGHCTSNPCYNGGTCEYLSEAPYYHCICPTSFNGLFCHILDYSFQGGPARDITPTT
EVTVRCEIAECEYKKGNKICDSTCNNYACDWDGGDCSLNFNAPWQNCSAALQCWRYFNNG
KCDEQCHNAGCLYDGFDCQRLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCAS
NIPEKLAAGLLVVVVHVLPDQLRNNSFGFLRELSRVLHTNVVFRRDGKGEEMIYPYYGNE
QELRKHNIKRSLDGWSNASRNVLSSEKNSIDNIVAEGGRKRRELDEMQIKGSVVYLEIDN
RQCYQQTSECFQSANDVAAFLGALASSGSLNMPYVIEAVTSKIDGPPAIELYPVYVVLAG
LALLAFVAVGMVASRKRRREHGHLWFPEGFKTSEPSKKKRREPVGEDSVGLRPLKNCSDI
SLMDDNQNEWGEDEPSDTKRFRSEEQAMLDLDDQPDHRRWTQQHLDAADLRIPSIAPTPP
QGELENDCMDVNARGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHN
QTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNATDDSGKSALHWAAAVNNVD
AAMVLLKNGANKDMQNNKEETPLYLAAREGSYETAKVLLEHFVNREITDHMDQLPRDIAQ
DRMHHDIVRLIDEYNLVRSPPMHSAPLCTTLSPPLCSPNAFMGSMKPSVQSKKPRKPSTK
GIGCKDGKDMKAKKKKAQDGKGNLQDSSAVLSPVDSLESPHGYISDVASPPLMTSPFQQS
PSMSLNHLQGISDAHMGVNHLGMGNKQELAHIQFDPLPPHLTHLPVAGSNGSNIMNGQCE
WLGRMHSSMSPQNQFGAMRNASGQANLHQSGLMTSLHNSRPATLSQMMNYQSLQNAHLTT
QSHLMMQQNMQQRPHQTNIQLQHQSSNPPSGMSQNLLCGELGGPELQQSTGNGMAIHTII
PQETQLLNPSSLGPSMAGTQFLTPPSQHSYSAPMDTNTPSHQLQGPDHPFLTPSPGSPDQ
WSSSSPHSNMSDWSEGISSPPTSMHSQIGQQFK
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttcctcgtgaaactaattcttcagatatcactccttacttggacgcaaggc
ctggaatgttcagaaaaatgccaaaatggtggtacatgtgaacctactggagatggaaga
ggagaatgcaggtgtcctgagtcatttgccggcacagcgtgccagttccccaacctctgc
ctccagtccccgtgcagaaatggtggcgtgtgccatttgattacttctgttaacaaggtg
gactttgtgtgcaactgcagcctgggctacacggaccgactgtgtctcactcccaccaat
aatgtgtgccttagctccccgtgccgaaacggaggcacatgtgaactcaccagcatccac
acttacaagtgtaaatgcccaccaggctggtcaggtaagacctgccatcaagctgatcct
tgtgcctcaaatccttgtgctaatgggggtaagtgtagtccctttgattccgactacatc
tgccactgcacgcccttcttctcaggccaaacctgcaaacaagacgtcaacgagtgtgcc
cagagtccctctccttgcaagaacggaggtctgtgtgagaacgaggtgggcacgtatcgc
tgcagctgccctgcagagtacactgggagacattgcgagaccctctatcagccctgtaac
ccttcaccatgctaccacggaggcacttgcgtccagaaaggagagacgagttacgagtgc
tcttgcttgccaggatttagtggtcagaactgtgaggagaacatcgatgactgcccagac
caccgctgccttaatggagggacctgtgtggatggagtgaacacctacaattgccaatgc
aagccagagtggacaggtcagttctgtaccgaagacgtcaacgaatgcgatttgatgccc
aattcctgccagaatggtggcacatgcttgaacacacagggtggatacaactgtgtgtgt
gtgaacggctggacgggggacgactgcagcgagaacatcaatgactgcgcagatgcagcc
tgccacgcaggagccacatgtcatgatcgggtggcctccttcctgtgcgaatgccctcat
gggcgcacaggtctgttgtgtcacctgaatgatgcttgcattagtaacccatgtcagaaa
ggctccaactgtgacaccaatcccgtcaatggcaaggccatctgtacctgtcctctgggt
tacgttggtctagcctgtgaccaagatgttgacgaatgctcgctgggtgcaaacccttgt
gaacatgccggaaagtgtataaacacaaaaggttccttccagtgtaaatgtctgctggga
tatgtgggagctcgatgtgaactggacataaacgagtgcatgtccaacccatgccagaat
gacgctacttgtttggatcaaatcggaggcttccattgcatctgcatgccaggctacgag
ggagtcttctgtcagatcaatactgatgagtgcgccagcatgccctgcctcaacaatggg
aagtgcatcgacaagatcaacaactaccagtgcgagtgccccacaggattctcaggtagc
cagtgccagttcgacatcgacgagtgcgctagcaccccttgtaaaaatggggcaaagtgt
attgatgggcccaacatgtacacctgccagtgctctgaaggatacacagggcagcactgt
gaaacagatgtagatgagtgtctatccaacccatgtcactatggcacctgtaaagacggc
ctggcatccttcacgtgtttgtgtcgtgcgggttttatgggccgtctgtgtgagatcaat
attaatgagtgtctcagtcagccatgccaaaatggaggcacctgccaggaccgtgagaat
gcttacctatgcatctgccctaaaggaacctcaggtgctaactgtgaggtcaacctagac
gactgtaaaagcaatccatgcgattttggaagatgcattgacaagataaatggttacgag
tgtgcctgtgaaccaggttacacagggaaaatgtgcaacatcaacattgatgaatgtgcc
atcaacccctgtcacaatggtggaacctgcgttgatggagtcaatggctttacatgtttg
tgcagagaggggtatcatgacaccacctgccaatcacagcttaacgaatgccttagcaac
ccctgtatccatggacactgtgaagacaaagtcaatggatataactgtatttgtgactcc
ggctggagtggtgtcaactgtgacatcaataacaatgagtgtgagtccaatccctgtatg
aatgggggcacctgtaaggacatgaccagtggctacgtctgcacatgccgcgctggcttc
agtggtcccaactgccaaacaaatatcaatgaatgtgcctccaacccttgcttgaatcaa
ggaacctgtattgacgatgtggctggatacaaatgcaactgtttgctgccttacactggc
gagaactgtgaaaccctgttggccccgtgcagccctaaaccctgtaagaatggaggtgta
tgtaaggagtctgaagactatgagagcttctcttgtgtgtgtcctgaaggatggcaaggc
cagacatgtgaagtggacatcaacgaatgtgtcaaaaacccttgccgaaacgaagccgtc
tgtcaaaactctgttggcagctacaaatgcagttgcaaatcaggctacacgggccgcaac
tgtgagacagacactgacgattgcacgcccaacccttgcagtaatggtggcttctgcaaa
gatgctgtgaatgccttcacttgcacctgcctgccaggtttccgggggagcaaatgtgag
gaggacattaatgaatgtaacagtaacccatgtaaaaatggtgcgaactgcactgattgt
gtgaacagttacatatgtacctgtccacctggattcagtgggattcactgtgagaacaac
acacctgactgcactgagagctcttgttttaatgggggcacatgtgtggatggcatcaac
agcttctcgtgcctgtgcccagcggggttcactggaaactactgtcagcatgacatcaac
gagtgcgactccagaccctgcatgaatggaggcacctgtcaggacagctatggcacatac
aagtgcacctgccctcagggataccacggccttaactgccaggagctggtgaactggtgt
aagccgtctccctgtaagaacggaggtatctgcagacagagcggcactaggtacagctgc
cagtgtcagacaggctggactggtttatactgtgacgtccccagcgtttcctgtgaggtg
gccgccaaacagcaaggtgtagaggtggcccggctgtgtcgtaactctggccagtgtctg
gacgctggaaacacacactattgtcactgtcaggctggatacacaggcagctactgtgag
gagcaagtggatgaatgcattcccaatccttgccagaatggagcaacctgcactgactac
ctgggcggctattcctgtggatgcgtgccaggttatcatggagtgaactgctctgatgag
atcaatgagtgtctgtctcagccctgccagaatggaggcacatgcatcgacctgatcaat
acctacaaatgctcctgtccccggggaacacaaggggtgcactgtgaaatcaacattgac
gactgcacacccttcaccgaccccatcacccaagaacccaaatgctttaaccagggccgc
tgtgtggaccgtgtgggcgggtaccactgcatctgcccggccggatatgtgggggaacgc
tgcgagggtgatgtcaatgagtgcttgtccaacccttgtgacccccgtggcacgcacagc
tgcatccagctgaagaacaactaccgctgcgattgtcgcacaggatacacaggtcagcac
tgtgacaaagtgtttgatggctgtaagggcaaaccttgccgtaatggaggcacctgcgct
gtggctagtaacactcctcacggcttcatctgcaaatgtccaccgggttttacaggctca
acttgtgagtataatgctcatgcctgtggtagtctccattgtaaaaatggcggtacatgc
atttctggtcacaagagccccaaatgcctgtgcacccctgccttcactggtcctgagtgc
cagtatcccactgatggtcactgcacatctaatccatgctacaatggaggcacgtgcgag
tatctctcagaagccccatactaccactgcatctgtcctaccagcttcaatggcctcttc
tgccacatcctggactacagcttccaaggtggccctgctcgagacatcacaccaactaca
gaagtgacagtgagatgcgagatagcagagtgtgaatacaagaaaggcaataagatttgt
gacagcacatgcaataattatgcctgtgactgggatggaggagactgctctctgaacttc
aatgctccatggcagaactgttcggccgcgctgcagtgctggcgctattttaataacggg
aagtgtgatgaacagtgtcacaatgctgggtgcctctatgacggatttgactgccagaga
ctggagggccagtgcaatccactttacgaccagtattgcaaagaccactatgcagatggc
cactgtgaccagggctgcaataatgctgagtgtgagtgggacgggctggactgtgccagc
aacatacccgagaagttagctgctggacttctggttgtggtggtccacgttttgcctgac
cagctccgaaacaactcctttggatttctgcgggagctcagccgagtgctccacaccaac
gtcgttttccggcgcgacggcaagggagaggaaatgatctacccatattacggcaatgag
caggagctgagaaagcacaacatcaaacgatcactagacggctggagcaatgcttctagg
aatgtcttgagctccgaaaaaaacagcattgacaatatagtggcggaaggaggaagaaaa
cgcagagaactggacgagatgcagatcaaaggctcggtggtctatttggagatcgacaac
cgccaatgctaccaacaaacctcggagtgcttccagagtgcaaatgatgtggcggctttc
ctcggagccctggcttccagcggcagtctgaatatgccttacgtaatcgaggccgtcaca
agtaagatcgatggaccaccggccatagagctctatccggtctacgtggttctggcagga
ctggcgctgctggcctttgtcgctgtgggaatggtcgcctcccgtaaacgccgccgcgaa
cacggtcacctctggtttccggagggtttcaagaccagcgagcccagcaagaagaagagg
agggaaccggtcggcgaagactccgtcggtctgaggccacttaagaactgctcagacatt
tcattaatggatgacaaccagaatgaatggggagaagacgaaccatcagacactaaacgc
ttcaggtcagaagagcaggcgatgcttgatttagacgatcagccagatcaccggcggtgg
acgcagcagcacttggacgcagccgatctacgcatcccatccatcgctcccacaccccct
cagggcgagttagagaacgactgcatggatgtcaatgcccgaggaccagatggctttact
ccactgatgattgcatcctgtagtggaggaggactagaaacaggaaacagcgaggaagag
gaggatgcttcggccaacgtcatcaatgacttcatctaccaaggagccaaccttcacaac
cagacggaccgtacaggtgagacagccctacacctggctgcccgctatgcccgctcagat
gctgcaaaaaggctcctggaggccagtgcagatgccaacatccaggacaatatgggacgg
actccattacatgctgctgtggctgcagatgcacaaggggtcttccagattttgatacgg
aaccgtgccacagacctggacgcccgcatgcatgatggcaccacacctctgatactggca
gcaagacttgcagtcgagggcatggtggaggaactcatcaactgccatgcggatgtcaat
gccacggatgattctggtaaatctgcacttcactgggcagcagctgtgaacaacgtagat
gcagcgatggtattgcttaagaatggggcaaataaagatatgcagaacaataaggaggag
actcctctgtacttggcggctagagaaggaagttacgagactgctaaagttcttctcgag
catttcgttaatcgggagatcacagaccatatggatcagctcccgcgggatatcgctcag
gaccgaatgcatcacgacatcgtgcggctcatcgacgaatacaacctggtccgtagccct
cccatgcacagcgcccccctatgcaccaccctctccccgcctctctgctcccccaatgcc
ttcatgggtagcatgaagccctctgtacaaagtaaaaaaccccgcaagccaagcacaaaa
ggcatcggttgcaaggacggtaaagatatgaaagccaaaaagaagaaggcacaggatgga
aagggaaacttacaagacagctcagccgtgctctcgccggtcgattccttggagtcacct
cacgggtacatatctgacgtcgcctccccacccctgatgacatcacccttccagcagtca
ccctccatgtcccttaatcacttacagggtatctcagacgcccacatgggcgtcaaccac
ctgggaatgggcaacaagcaagaactggcccatatacagtttgatccgttacccccacat
ctcacccatcttccagtggccggatctaacggctctaacattatgaatggccagtgcgaa
tggctcgggcggatgcacagtagcatgagtcctcaaaatcaattcggagccatgaggaac
gcctcaggtcaggccaaccttcaccagtccggcctgatgacgtctcttcacaacagccgt
cccgccacgctgtctcagatgatgaactatcagagcctgcagaacgctcacctcaccaca
cagtcgcatctaatgatgcagcagaacatgcaacagagaccgcatcagacgaacatccag
ctgcagcaccagagctccaatccacccagcggcatgagtcaaaacttgctctgtggcgaa
ctgggtggaccagagctccagcagagcacggggaacggcatggccatccacaccatcatc
ccccaggagacccagctgctgaacccatcctctctgggccccagcatggctggaacgcag
ttcctgacaccaccttcccagcacagttactcagccccaatggacaccaacacccccagc
caccaactccaagggcctgaccacccattcctcacgccatctccgggttcaccggaccag
tggtccagctcatctcctcattccaacatgtctgactggtcagagggcatttccagccca
cccactagcatgcattcgcaaatcggacagcagttcaagtaa
DBGET
integrated database retrieval system
