KEGG   Carassius gibelio (silver crucian carp): 128000895
Entry
128000895         CDS       T08819                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03320  PPAR signaling pathway
cgib04120  Ubiquitin mediated proteolysis
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128000895
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128000895
   04137 Mitophagy - animal
    128000895
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    128000895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    128000895
Ubiquitin system [BR:cgib04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   128000895
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 128000895
NCBI-ProteinID: XP_052448263
LinkDB
Position
A5:complement(20716610..20721616)
AA seq 611 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGSDI
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagaccttgacaggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaacgtcaaggccaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgccggcaaacagctggaagatggtcgcacattgtctgactacaac
atccagaaagagtccaccttgcacctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccttgaccggcaagacaatcacccttgaggttgagccaagcgacaccattgag
aacgtcaaggccaagatccaggacaaagaaggcattccccctgatcagcagaggttgatc
tttgccggcaaacagctggaagatggtcgcacattgtctgactacaacatccagaaagaa
tccaccttgcacctggtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccttg
accggcaagaccatcacccttgaggttgagccaagcgacacaattgagaacgtcaaggcc
aagatccaggacaaagaaggcattccccctgaccagcagaggttgatctttgccggcaaa
cagcttgaagatggccgcacattgtccgactacaacatccagaaagagtccaccttgcac
ctggtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccttgaccggcaagacc
atcacccttgaggttgagccaagcgacaccattgagaacgtcaaggctaagatccaggac
aaagaaggcattccccctgaccagcagaggttgatctttgccggcaaacagctggaagat
ggccgcacattgtccgactacaacatccagaaagagtccaccttgcatctggtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccttgaccggcaagaccatcacccttgag
gttgagccaagcgacaccattgagaacgtcaaggccaagatccaggacaaagaaggcatt
ccccctgaccagcagaggttgatctttgccggcaaacagctggaagatggtcgcacattg
tctgactacaacatccagaaagagtccaccttgcacctggtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccttgaccggcaagacaatcacccttgaggttgagccaagc
gacaccattgagaacgtcaaggccaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgccggcaaacagctggaagatggccgcacattgtccgactacaac
atccagaaagagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccttgaccggcaagacaatcacccttgaggttgagccaagcgacaccattgag
aacgtcaaggccaagatccaggacaaagaaggcattccccctgatcagcagaggttgatc
tttgccggcaaacagctggaagatggccgcacattgtccgactacaacatccagaaagag
tccaccttgcacctggtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccttg
accggcaagacaatcacccttgaggttgagccaagcgacacaattgagaacgtcaaggcc
aagatccaggacaaagaaggcattccccctgatcagcagaggttgatctttgccggcaaa
cagctggaagatggtcgcacattgtccgactacaacatccagaaagagtccaccttgcac
ctggtgctgcgtctcaggggaggttcagatatttaa

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