Carassius gibelio (silver crucian carp): 128001428
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Entry
128001428 CDS
T08819
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128001428
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128001428
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128001428
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128001428
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
128001428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
128001428
NCBI-ProteinID:
XP_052448320
LinkDB
All DBs
Position
A5:20735486..20841734
Genome browser
AA seq
2414 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYAFSSTRHPSEFPVPDYRSPLQDQQRRRPSLLSE
FHPGTERPPERRHGYEQQFHAVQAQQELETLEAKRLRIENVSEAHFPRAQPTGIVLPHPQ
TIQDSFRITGDVKKEAQYSVKVDASSPGGVPQVGVDADPSPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEEAHK
ILEGLGPKVELPLYNQPSDTKIYHDNIKTNQMMRKKLILFFKRRNHARKQREQKICQRYD
ELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEVFKEKFVQHPKNFGLIASFLERKCVSDCVLYYYLTKKSQNYKTLVR
RNFGNRRRRNQQITRPSQEDKADDKNEEDKSEKTEKKEDEEKKEEEEKDEKEDSKDIGKD
KEKCEGEEEEGKEQSTPRGRKTANSQGRRKGRITTRSMANNEAASVVAEEPEPALPEPTP
PSKPEPVQKPAREPAKPSPAASAETRGAVEAGETSRWTEEEMEIAKKGLVEHGRNWSAIA
KMVGTKSEAQCKNFYFNNKRRYNLDNLLRQHKVQGSRRLRGNRDPSQSDPAPDDDEESDG
ADNSSDTESAPSPSQTDSSKSDPVTHPNFALDGTSDQDDMVTKGPVADAKGQEPPYCELR
VKVEKSPEGEAGDGLPQDERTRSAFEMQIHPKTEPQDLEMTSPSSERAQVQVKTEPDIKD
KEEKREEQHHSDNDSSATCSADEDVEAEPDRQRLFSLEKPSLLGTAGSVVLSSAKILNMQ
QLQQRAATIPPMVSPHSFYPHLAFIYAPLDRDRAQPPRHVSAPFGHSNVPVGPLSGFAMF
QHQIKAVHESVQEDKQRLDQNESDHRPRVNTHSPTVVDREGKPFAYMPYDLKLMEQESHG
GVGRPGSPYRLSPREPSKASPQPDASNATRYTVPPVLQPAPNQAVQTLSDVRMAFPHHRP
TNIPSPPPLIHSKPTDKPSFIQGGSISQQGTPGTYLPSQMQAVYVPEVVKTTGGSISLGL
PRQQDPAKPVSYIKQEECSPRGQSSQAEGLLSRAQYEGVVRVGPIQIPDMRGPPGKSPEG
LSFRGGSITQGTPALAQSNVAADLLKGTIAKLATEDLSCPEKSRAEAHSKAHVIYEGKSG
HILSFDAVKNPREGTRSPRMGLDLKRTYDIMEGSRGHPTRETAPYEGLISRALPRENPHE
SKDRSILTGSIMQGTPRASEVYDEASKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKE
MGRSIHEIPRKETQDSRKTPVLDGSITQGIPLKYESSTVNPSAIKHNVKSLITSPVKISH
SAIEAAERERAKYEDAKASERVRHTSVVNSTSVLRSTHTEAGKSQLSPGMYEDSNARRTP
TYSGTSISRGSPLLRGQDGSIATGKPASHERKNTLTPTQRDSVPAKSPVSGGEPLGSHSP
FDPHHRSVVPGEVYRTHLPPHLDPSLAFHQAYMFPRQPSPTGYPNTYQLYTMENTRQTIL
NDYITSQQMRPDVTRGLSPREQSIAIPYPPARGIIDLAQMPPTILLPHPGGTVSPSLDRI
TYIPGPQTPFPARAFNPASISPGHPAHHSATAAIVERESQREKERERERERERDQRERER
AAVEYMRGGSEQPGRPGSRSFLRSTSPSVRSQEGVLQQRPSIFQGTNSKSVITPLMQMPS
QAAASQSSYSAADALAALVDAAASAPQMDVAKVKEGKHNNSSSRDDAVMSSRRAAQESQE
VERRSVQSPYGDVPLPSGKPSHPVYAEGGGPAGSKEKAPPTKSRMEEELRTHGKTTITAA
NFIDVIITRQIAPDKDSRERGSQSSDSSSSMSSSRYDAPGGIEVISPAQSPALREEKNEG
SFPSEKSSQPHTGLRFDMNRFRQSGESGPSAPQQPPSSQADSYGPVPKTHRIMTLADHIS
HIITQDFAKSQDAPPSSSSLPSSSSSSSSLSSTGVGGRVKAPNRYSPENPAPTAHHQRPP
SRVSPENASDKQRARPGRSPDRGRGAENYEPISPPQGYSGSDKPEARVLQGQRREQDLPE
QRTDSRSPGSSSYLPSFFTKLESTSPMVMSKKQEIFRKAEVGNAQPGTEIFNLPAVTTSN
SVNPRNHSFSDPASNLGLEDIIRKALMGNMEEKQEDQQQQRQVQLGTGNTSGSISDSRQE
ASPSPNTAGKQKLQSKANSRKSKSPNPGQAYSAGERPSSVSSVHSEGDYHRQAPTWAWED
RPSSTGSMQFPYNPLTMRMLSSTPPTSMASLSPSMQSQQQPQGGVSGPVTLTRAWEREPP
LLSEQYETLSDSDD
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttcaggctttccccccagccagggatccttcagcagcgagcagagccgttac
cctcctcactcagtgcagtacgccttcagctccacacgtcacccttcggagtttccggta
cctgactaccgttccccccttcaagaccagcagcgccgcaggccttcactactatctgaa
ttccatcctgggaccgagaggccgccggagcgcagacatggttatgagcaacagtttcat
gccgtccaagctcagcaggagctggaaactctcgaggccaagcgtctccgcatcgagaat
gtatctgaagcgcactttccaagggctcagcccaccggcatcgtcctgccccatccacag
accatacaggacagctttaggatcaccggagatgtcaagaaggaagcccagtatagtgtg
aaggtggatgcctcatccccaggaggagttccacaggtgggtgtggatgcagacccatca
ccctccaaactctccaaggaggagttgattcagagcatggaccgcgttgaccgtgagatt
gccaaggtcgagcaacagattttcaaactgaaaaagaaacagcaacaactggaggaggag
gcagcaaagcctgtagagccagaaaagccagtgacgccaccccctgtggaacacaaacat
cgcagcatcgtccagatcatttatgatgagaaccggaaaaaggcagaagaagcccataag
atactggaagggttggggcctaaagtggagctgcctctgtacaaccagccctctgatact
aaaatctaccatgacaacattaagacgaatcagatgatgaggaagaagctgattctgttt
ttcaagaggaggaaccacgcacgcaaacagagggaacagaaaatttgccagcggtatgat
gagctgatgacggaatgggagaaaaaggttgagagaatggagaacaacccacgccgtaaa
gccaaggagagccgcacgcgtgaatactacgagaggcagtttcctgagatccgcaaacag
cgtgagcaacaggaacgcttccagagggtgggccagagggggacaggcctgtctgccacc
atcgcaagaagtgaacacgagatatccgaaatcattgacggcctctcagagcaggagaac
aatgagaaacagatgaggcagttgtccgtcattcctcccatgatgtacgattccgaacag
cggagagtgaagtttatcaacatgaatggtctgatggatgacccaatgaaggtctacaaa
tcccgccagttcatgaatgtctggaccgaacatgagaaggaggtcttcaaggaaaagttt
gtgcagcatcccaaaaactttgggctgatcgcttcattcttggagagaaagtgtgtgtct
gattgtgtgctgtactattatttgactaagaagagtcagaactataaaactcttgtccga
cgaaattttgggaatcggcggcgaaggaatcagcagataacgcgaccttcacaggaagac
aaggcagacgacaagaacgaagaggacaaatcggagaaaacagagaagaaagaggacgag
gagaagaaggaagaggaggagaaagatgaaaaagaggactccaaggacatcggtaaagat
aaagagaagtgtgagggagaggaggaagagggtaaggagcagagcacgccacgcggcaga
aagaccgccaacagccagggccgccgtaagggccgcatcaccacacgctccatggccaat
aatgaggctgcgtctgtggttgcagaggaacctgaaccagctctaccagagcccaccccc
ccctctaaacctgagccggtgcagaaaccagcacgagagcctgcgaaaccgtctcctgca
gccagcgcagagacacgaggtgcagttgaagctggagagacgtctcgctggacagaggag
gagatggagattgccaaaaaagggctggttgaacatggtaggaactggtcagccattgct
aagatggtaggcactaagagtgaagctcagtgtaagaacttttacttcaacaacaagaga
cgatacaacctagacaatctactacggcaacacaaggtacagggttcccgtcggctccgt
ggaaatcgagacccatcccagagtgatcctgcacctgatgatgatgaggagagtgatggt
gctgataacagttcagacacagagagtgcgccttctccatctcaaactgattcctccaaa
tcagaccctgtaacccatcccaactttgctctggacggcacgtcggaccaggacgacatg
gtaaccaaaggcccagtggcagatgccaagggccaggagcctccgtactgtgagctgcgg
gtgaaagtagagaagagtccagaaggagaagctggagacggacttcctcaggatgagcgc
acacgctccgcgtttgaaatgcagatccatccaaagactgagccgcaggatctggagatg
acttctccgagcagtgaaagagcgcaggtgcaagttaagaccgagccagatatcaaggac
aaggaggagaaacgggaggagcagcaccactccgataatgattctagcgccacctgcagt
gcggatgaggatgtggaagccgaacctgaccgacaaagacttttctctctggagaagccg
tcattgcttggcactgcaggctcggtggtcctgtcctcagccaaaatcctcaacatgcag
cagctacagcagcgagccgccaccattccccctatggtcagtccccatagcttctacccc
cacttagcattcatatatgcccctctggacagagacagggcccagccaccccgccacgtt
tcagctccattcggtcacagcaacgttcctgtaggaccattgagtggctttgctatgttc
cagcaccaaataaaagctgtacatgagtccgtgcaggaggacaaacagagactggaccag
aacgagtctgaccacaggccacgagtcaacacccacagcccaactgtagtggacagagaa
ggaaagccgttcgcttacatgccatatgacctgaagctgatggagcaggaatctcatggt
ggagtgggcagaccaggctctccgtacagactctctcctcgggagcctagcaaagcctca
cctcagcccgacgccagtaacgccacccgctacactgtacctccagttcttcagccggca
ccaaaccaggcagttcagactctgtcagatgtccgcatggcttttccccatcacaggccg
accaacattccgtctcctccgcccctcattcactccaaacccaccgacaagccctccttc
attcaggggggctccatttcacagcagggaacaccaggaacataccttccctctcaaatg
caggctgtgtatgtaccggaggtagttaagaccacaggagggtcgatctcacttggcttg
ccaagacagcaggaccctgccaaacctgtgtcatatattaagcaggaggagtgttctcca
cgtggacagagctctcaggcggagggtcttttatccagagctcagtatgagggagtggtc
agagtaggacccatacagattccagatatgagagggccgcctggaaaaagcccagagggc
ttgagtttcagaggaggctccattacacagggcactcctgcgctggctcagtccaatgta
gcagcggatctgttgaaaggaactattgctaaactggccacagaggacctgagctgccca
gagaagagccgagctgaagctcactctaaagctcatgttatctatgaaggcaaaagcgga
cacattctctcttttgatgccgttaagaaccctagagagggcactagaagcccacgaatg
gggctcgatctcaagcgcacatatgacatcatggagggctcccgtggacacccaacacgt
gagacggcaccttatgaaggtttgatcagcagagcactaccaagagaaaatcctcatgag
tctaaggatcgctccatactcacaggatccatcatgcaaggaacaccaagagcctctgaa
gtctatgatgaggcctctaaatatggtaaacagatcaagagggaaagtccacccatacgc
tcttttgagggaggcatcacgaagggtaaaccatatgaaggggtgaacaccataaaggag
atggggcgctcaattcacgagattccccgtaaggagactcaagatagtcgaaaaactcct
gttctggatggatccattactcagggtattcctctaaagtacgaaagcagtactgtgaac
ccatcagccatcaagcacaatgttaaatctctgatcacaagcccagtgaagatctcacac
tctgccatcgaagcagctgagcgagagagggccaagtatgaggatgcgaaggcgtccgaa
cgtgttcgtcacacttctgtagtaaactccacctctgtcctgcgctccacacacacagaa
gcgggaaaatctcaactcagtccaggcatgtatgaggacagcaatgcacgcagaacccct
acatactctggcacctccatatccagaggatcacctctgctacgtgggcaagacggaagt
atagcaacaggtaaaccagcttctcatgaaaggaagaacacactgactccaacccagagg
gacagtgttcctgccaagtcgcctgtgtccgggggtgaacctcttggttctcacagcccg
tttgacccacaccatagatctgtagtacctggagaggtgtaccggacccacctaccacca
cacctggaccccagcctcgcttttcaccaagcatacatgtttccgaggcaaccatcgccg
accggttaccccaacacataccagctgtacacgatggaaaacactcggcaaaccattctg
aacgattacatcacctcacagcagatgcgccctgatgtcacaaggggactgtcaccacgt
gaacagtcaattgccatcccatacccaccagctagaggaataattgatctagcccagatg
ccacctactatcctgttacctcaccctgggggcacagtttccccttccctggaccgcatc
acctacatccctggacctcagacccctttccctgctagggcattcaaccctgcctccata
tctccaggacatcctgcccatcatagtgccactgcagctattgtggagagggagagtcag
agagagaaggaacgcgaaagggaaagggagcgagagagagatcagagagaacgagaacgt
gcagcagtagaatatatgcgtggaggttctgaacaacctggccgaccaggcagtcgtagt
tttctgcgttccacttcaccctctgtgagatcacaggagggcgtcctccaacagcggccg
agcatcttccagggcaccaactccaagagcgtcattaccccactcatgcaaatgccctca
caagcggctgcatctcaatccagttacagtgcagctgatgccctcgccgcccttgtggat
gctgccgcctctgccccgcagatggatgtggcgaaagtcaaggagggcaagcacaataac
agtagctcccgggatgatgccgtgatgtcatcacgacgggcagcacaggagtcgcaagag
gtggagcgtcgttcagtgcagtctccatatggggacgtaccacttcctagtgggaaacct
tcccatcctgtgtatgcagagggtggaggacctgcagggagcaaagagaaagccccaccc
accaagtcacgcatggaggaggagctacgcacccatgggaagaccaccataactgctgca
aactttattgatgtcatcatcacgcgccagattgccccagataaagattcccgtgagaga
ggctcacaaagctcggactcctccagcagcatgtcatccagtcgttatgatgctccgggt
ggaatcgaggtgatcagccctgctcagtctccagccctgagagaagagaagaacgaaggg
tctttcccatcagaaaagagctctcagccacacacaggattaaggtttgacatgaaccgg
ttcaggcagtcaggagaatcaggaccttctgcccctcagcagcccccctcctcacaagca
gacagttatggacccgtcccgaaaacacaccgcatcatgaccctcgccgatcacatttca
catatcattactcaggactttgccaagagccaagatgctcccccatcatccagctcactg
ccttcctcttcatcctcctcctcctcactctcctccacaggtgtgggaggtcgagtaaaa
gcccctaaccgctatagtccagaaaacccagctcctactgcacaccaccagagaccacca
agcagagtctctcccgagaacgcctccgataaacaaagagcaaggccaggtaggtctcct
gatcgaggacgaggagcagagaactatgagcccatctctcctcctcagggttattctggg
tctgataaaccggaggccagagtgctgcagggccagagacgagagcaggatctccctgaa
cagaggactgactcgcgctccccaggcagcagcagttacctgccctcattctttaccaaa
ctggagagcacgtctcctatggttatgtccaaaaagcaggagatcttccgcaaagcagaa
gtcggtaatgctcagccaggcaccgagatcttcaatctcccagcagtaacaacatcaaac
agtgtaaaccctagaaaccactcgtttagtgatccagccagtaatctgggtctggaggac
atcatcaggaaggctctgatggggaacatggaggagaagcaggaggaccagcagcagcag
cgtcaagtccagctggggacaggaaacacctcaggcagtatttcagacagccgacaggag
gccagcccatcccctaacacagcaggaaaacagaagctgcagagtaaagctaacagcagg
aagtcaaagtctcctaacccaggccaggcgtactctgccggagagcggccctcttctgtg
tcctccgttcattcggagggcgattaccacagacaggctcccacatgggcttgggaggac
cggccatcatccacaggttccatgcagttcccttataaccccttgacgatgcgcatgctc
agtagtactcctcccacatccatggctagcttatctccctccatgcagtcccagcagcag
ccgcagggtggcgtctctggtcccgtgaccctgacgcgagcatgggagagagagcccccg
ctactgtcagagcagtacgagaccctctcagacagcgacgactga
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integrated database retrieval system
