Carassius gibelio (silver crucian carp): 128001851
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Entry
128001851 CDS
T08819
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04137
Mitophagy - animal
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128001851
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128001851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128001851
03009 Ribosome biogenesis [BR:
cgib03009
]
128001851
04131 Membrane trafficking [BR:
cgib04131
]
128001851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128001851
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128001851
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128001851
Membrane trafficking [BR:
cgib04131
]
SNARE
SNARE associated proteins
Others
128001851
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128001851
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128001851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
128001851
NCBI-ProteinID:
XP_052448359
LinkDB
All DBs
Position
A5:20953076..20963800
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AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETIVEVPNISWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSSGGGGGPIFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgatgatctttccactgccattctaaagcagaag
agcaggccaaataggctgattgttgatgaatccatcaatgaagacaacagtgttgtgtct
ctctctcaggcaaagatggatgagctccagctctttaggggggacacagtgctgttgaag
ggcaagaagaggagggagaccgtttgcatcgtgctgtccgatgacacctgctctgatgaa
aaggtgcgcatgaacagggtggtccgcaacaacctcagagtgcgccttggtgatgtcatc
agtattcagccatgtccggatgtgaagtatggaaagcgaattcatgttctacccatcgat
gacacagtggagggcatcactggcaacctgtttgaggtctatcttaaaccttacttcttg
gaggcttaccggccaatccgtaaaggtgatattttcctggtcagaggaggcatgcgcgct
gtggagttcaaagtggtggagactgaccccagcccatactgtattgtggccccagacaca
gtgatccactgtgagggagaacccatcaagagagaggatgaggaagagtctctgaatgag
gtgggttatgatgacattggaggggtaaggaaacagctcgcccaaatcaaagaaatggtg
gagctgcccctgagacacccagctctcttcaaggctatcggagtgaagcctccccgtggt
attctgctgtatggacctcctggaactggaaagacactcatcgctcgtgctgtggctaat
gaaactggagcgttcttcttcctaatcaatggccctgagatcatgagtaaactggcaggt
gaatctgagagcaatttgcgcaaggcttttgaggaagcagagaagaatgcaccagccatc
atctttattgatgaactggatgccattgcaccaaagagagagaagactcatggtgaggtg
gaaaggcgcattgtgtctcagctgctcacgctgatggacggactgaagcaaagggctcat
gtcatcgtcatggcagccactaacagacccaacagcattgacccagctctcaggcgattc
gggcgctttgacagagaggtggacatcggtattccagatgctactggaagacttgagata
cttcagatccacaccaagaacatgaagcttgcagatgatgttgatctggagcaggtggca
aatgagacccatggccacgtgggtgctgatctggctgccctttgctcggaggctgccctg
caagccatcagaaagaaaatggacctcatcgatctggaggatgagaccattgatgctgag
gttatgaactccctggctgtgacgatggatgacttcaggtgggctcttagccagagcaac
ccctctgccctgagagagacaattgtggaagtgcccaacatcagctgggaggatattggt
ggcctcgatgatgtcaagagagagctgcaggagctggtgcagtacccagtggaacatcca
gacaaattccttaagtttggcatgaccccatccaagggtgtgctgttctatggaccacca
ggctgtggtaaaactctgttggccaaggccattgccaatgagtgccaggccaacttcatc
tcaatcaagggcccagaactgcttaccatgtggtttggagaatcagaggctaatgtccgt
gagatctttgacaaggctcgtcaagctgctccttgtgtgctcttctttgacgaattggac
tccattgctaaggctcgtggaggaaatgttggtgacggtggcggcgctgctgacagagtc
attaaccagattctcacagaaatggatggtatgtccagcaagaagaacgtcttcatcatt
ggggccaccaacagaccagacatcattgaccctgccatcctcaggcctggccgactggac
cagctcatctacatcccactgcctgatgagaagtctcgcatgtccattctcaaagctaac
ctcaggaagtctccaatctcaaaggacgtggacctggactacttggccaagatgaccaat
ggcttctctggtgctgacttgactgagatctgtcagagagcctgtaaactggccatccgt
gagtccattgagaatgaaatcagacgggaacgcgagaggcagaccaacccttctgcaatg
gaggtggaggaggatgaccctgtgcctgagattagaaaggaccattttgaggaagccatg
cgctttgcccgccgctctgtcagtgataacgacatacgcaaatacgagatgttcgcacag
accctgcaacaaagcagaggctttggcagtttcagattcccatccagtaaccaaggagga
agtggaccaagtcagggctcttctggtggcggcggaggccccatcttcaatgaggacaac
gatgatgatctttatggataa
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