Carassius gibelio (silver crucian carp): 128009262
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Entry
128009262 CDS
T08819
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128009262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128009262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128009262
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128009262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF
NDNF
fn3_2
FN3_Tor_3rd
hEGF
REJ
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
128009262
NCBI-ProteinID:
XP_052448897
LinkDB
All DBs
Position
A5:27885641..27917603
Genome browser
AA seq
1783 aa
AA seq
DB search
MGMQGLLLACVAVAMLVHLSSAGLVKRVLRHRREYLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTPLKPKSANLQSDQHIEHTTDGENQIVFTHRINIPKQACSCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTGCCGAQVTAGEVTTKPYCSGRGNYSTETCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSIELCPVDCGENGECID
GACICAEGFIGEDCSLTNCLNNCLGRGRCVDDECVCEEPWTGFDCSELICPNDCFDRGRC
DNGTCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNTGYSGDDCSKLTCLNDCRQRG
HCFNGKCICDPGFEGEDCSILSCPDNCNGRGHCVNGECICGVGYKGDDCSELSCFNNCHD
RGRCVNGKCICKMGFTGEDCSIKTCHHDCHGHGECVDGKCVCHNGFAGDHCGIKTCPHDC
HGRGHCVDGKCVCHNGFAGQHCGIKTCPHDCHGHGQCVDGKCICRDGFAGEDCSIKTCPN
DCHERGQCVDGRCVCHAGFTGHDCSELTCPSDCHNRGRCVNGQCVCNIGFTGEDCGTKTC
PNNCLDRGYCEDGKCVCFEGYTGEDCSVLTCPANCNDQGQCLDGMCICDLGFTGDECSEI
SPPRDLTVTEVDPETVDLAWVNEMLVTEYLITYVPTAPGGLEMEMRVSGEKKTATIRELE
PGIEYLISVFAVLNSKMSVPVSARIATHLPEPEGLKFKSVRETSVEVEWDPLNIPFDGWN
LIFRNTKEEDGEILNSLTPPETTFEQSGLGPGQEYEVKLEVVKNNTRGPPASKNVVTMID
APSQVDVRDVTDTTALITWFQPVAQVDAISVSYGPNTDSSNRKTIKLSSMDTQYHLAELY
PDTEYEVSLMARRGDMTSFPIYETFTTDLDAPKHLKAAEQTDESITLEWKNSRANVLNYR
VKYGPLSGGEHGELVFPSGPQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVTD
LDAPKDLEVSDTTETTLTLVWRRPVAKIDTYELVFTSTDGTETELEVPGADNTYILTDLN
PGMLYTISLTAKRGRKMSAPATLSASTDEEKPQVGNITISDVSWDSFSVSWELDRGEVEG
FLVEVSGPDDLSNGQNHTLSSQEFSLAVTDLSPSTFYRVVLYGLYKGELLDPVFAEAITE
DEPEVEHLSVSDITPHSFKLTWTAPEDIFDTFTLKVVDSNRLGKPLQISVSGDKRTEAVT
GLTEDTKYEIQLFGIILGQKFQPILTVARTGLGTPKGIRFSDVTDTSAAVHWILPRNRVD
SYRVTYVPIQGGSPMTLRVDGGESQAMLPSLTPGVTYQVTVIAVKGLEESEPGSDRVTTA
LDKPRGLTAVNITDTEALLLWQPSIATVDGYVITYSADSVAPVMERVSGNTVEFGMSSLT
PATLYTVKVYAVREAAKSAATTTEFTTDVDAPQNLAVSNIQTESAMLTWKPPRADISGYI
LSYESTDGIVKEVVLSPTATFYSMSPLTSSTEYTVKLQAIAGPKRSRIISTVFTTIGVLY
KLPKDCSQTLLNGETTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFR
NWKNYTAGFGDLNDEFWLGLSNLHKITSSGQYELRVDLRDKGESAYAQYDKFSVSEPRSR
YKVHVGGYSGTAGDSMTYHHGRPFSTYDNDHDIAVTNCALSYKGAFWYKNCHRVNIMGRY
GDNSHSKGVNWFHWKGHEHSIEFAEMKIRPTNFRNFEGRRKRS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcaaggcctgctactggcctgtgtggcagtagccatgttagttcatctatct
agtgctggcctggtgaaaagagtacttagacacagaagagaatatctgtcaccaaccacg
gagaacttgaccctcccaagccccgatcagcctgtggtttttaaccatgtatacaacatc
aatgttccttctggatccctgtgctctgtggacttggattcacctggaacaacaccattg
aagccaaaatcggccaatctgcagtctgaccaacacatagaacacaccacggatggagag
aatcaaattgttttcacgcataggattaacattcccaagcaagcttgtagttgtgataac
cacatgcccgacctgaaggatcttctgaacaggctggaaatgctggaggcagaggtatcc
agtctaagagagcagtgcaccagtggaacaggctgctgtggtgctcaggttacagcaggt
gaagtcacaacaaaaccctactgcagtggccgtggcaactacagcactgagacctgcagc
tgtgtgtgtgagcccggttggaagggagtcaactgctctgagccagaatgcccgaacttt
tgccaggatcaaggccgttgtgaagacggcaagtgtgtctgcttcgagggcttcggtggc
gaggactgcagcatcgagctttgccctgtggattgcggtgagaatggagaatgtatcgac
ggagcttgcatatgtgcagagggctttatcggtgaggactgcagtttgaccaactgccta
aacaactgccttggcagggggcgctgtgtggatgacgaatgtgtatgtgaagagccttgg
acgggctttgactgctccgaactcatctgtcccaacgactgctttgaccgtggccgctgt
gacaatggaacctgctactgtgaagagggttttactggggaagactgtggggaacttacc
tgccccaaaaactgcaaccaccgtggcaggtgtgtcaatggacagtgtgtctgcaatact
ggctacagcggagatgactgctccaagctaacctgtctcaatgactgcagacagagaggg
cactgcttcaatgggaagtgcatttgtgaccctgggttcgagggcgaggactgtagcatt
ctttcctgccctgacaactgcaatggcaggggacattgcgtaaatggtgagtgtatttgt
ggtgttggctataaaggtgatgactgctctgagctttcttgcttcaataactgtcatgat
cgtggccgatgtgtcaacgggaagtgcatttgcaaaatgggctttactggagaagactgc
agcatcaagacctgtcatcatgactgccatggacacggagagtgtgtagacggcaaatgc
gtttgccataatggctttgctggagatcactgtggcatcaagacctgtccccatgactgc
catggacgtggacattgtgtagacggcaaatgcgtttgccataatggctttgctggacaa
cactgtggcatcaagacctgtccccatgactgccatggacatgggcagtgtgtagatggc
aagtgcatttgccgtgatggttttgctggagaggattgcagcatcaaaacctgtcccaat
gactgccatgagcgtggacagtgcgtggatggcaggtgtgtttgccatgctggttttact
ggccatgactgcagtgagttgacttgccccagtgactgccataaccgaggacgttgtgta
aatggtcaatgtgtttgtaacattggattcactggggaggactgtggtacaaagacgtgt
cccaataactgcctggaccgtggctactgtgaagatggaaagtgtgtctgctttgagggg
tacaccggtgaagactgctctgttctgacatgcccagcaaactgcaatgaccaaggccag
tgtctggatggaatgtgcatatgtgatttaggcttcactggcgacgagtgctctgaaatc
tccccacccagagacctgactgtgaccgaggtcgatccagaaacagtggaccttgcctgg
gtcaatgagatgcttgtgacggagtatcttatcacctatgtgcctacggctcctggtggc
ttggagatggaaatgagagtctctggtgaaaagaagacagccactattagggagcttgag
cctggcatagagtacttaatcagtgtatttgctgtcctgaacagcaagatgagtgtccct
gtcagtgccagaatagccacacatcttcctgaacccgagggcctgaaattcaaatcagtt
agagagacctcagtggaggtggagtgggaccccttgaacatcccgtttgatggctggaac
ctcatcttcagaaacacaaaagaagaagatggagagattttgaactctcttacccctcct
gagaccacctttgagcagtctggtcttggacctggacaagagtatgaagtcaagcttgag
gtcgtaaagaacaacacccgtggacccccagccagcaagaacgtggtcacaatgattgat
gctcccagccaggtggatgtgcgtgatgtgacagacactacagcccttatcacctggttt
cagcctgtcgctcaggtggatgccatctctgtgtcctatggcccaaacacagattcctca
aacaggaaaacaatcaagctttcctccatggatacacagtaccatcttgctgagctgtac
cctgacacagagtatgaggtctctctcatggcccgcaggggagacatgaccagctttcca
atctatgagaccttcactacagaccttgatgccccaaagcacctcaaggcagctgaacag
acagatgagagcataactctggagtggaaaaacagcagagccaatgtcctcaattaccgg
gtcaaatatggcccactttctggaggggagcatggagaactggtcttccccagcggcccg
caagacaccactcaggctaaaatcactggccttaggcccgggacggagtatggaatggga
gtgacatcaattaaggaagagcgtgagagtttgcctgcgacgaccaatgctgtgactgat
cttgatgcccccaaagaccttgaagtaagtgacaccacagagaccacattgacactggtt
tggaggaggccggtcgccaaaatcgacacctatgagctggtgttcacatctacggatggc
acagaaactgaattggaggttcctggtgctgacaatacatacatcctgactgacctgaat
cccggcatgctgtacaccattagccttactgccaagagaggaagaaagatgagtgcgcca
gccacactgtcagcatccacagatgaagagaagccccaggtgggcaacatcaccatctct
gatgtgtcctgggacagcttcagtgtgtcctgggagctggacagaggagaggttgagggc
tttttggttgaagtatctggcccagatgacttatctaatggccagaaccatacactatcc
agccaggagttcagcctggctgtcactgacctctccccaagtactttctacagagtcgtt
ctgtatgggctgtacaagggagagctcttagatcctgtctttgctgaagccatcacagaa
gacgaacctgaagtggagcatctttcggtctcggacatcaccccgcacagctttaaactg
acatggacagcaccagaagacatcttcgatacattcactctcaaagtcgtcgattcgaac
agactgggaaaacctctccagatcagtgtatctggagacaagcgaacagaagcggtgaca
ggtctcaccgaagatacaaagtatgaaatccagctctttgggatcattttgggacagaaa
ttccagcccattttgaccgtagctcgaacaggtctgggaacacccaaggggatacgcttt
tctgatgtgacagacacatcggctgctgttcactggattttgccccgtaaccgtgtagac
agctaccgggtcacctacgtgcccattcaggggggaagccctatgacactgagagtagat
ggaggggagtcccaagccatgctgcccagtctgacccctggagtaacctaccaggtcact
gtcatcgctgtgaagggcttggaggagagtgaaccaggatctgatagagtcaccacagcc
ctggataagccacgaggtctgacagcagtcaacatcactgacactgaagctctgctgctg
tggcagccgtccatcgctactgtggatggatatgtcatcacttacagcgcagacagtgtg
gctccagtgatggaacgggtgtctgggaacactgtggagtttgggatgagctcactcaca
cctgccactttatacaccgttaaagtctatgctgtcagagaagcagccaagagtgctgca
accaccacagagttcaccacggatgttgatgcccctcagaatctggctgtcagtaatatt
caaacagagagcgccatgttgacatggaagccaccaagagcagacatcagcgggtatatc
ctcagctatgagtccactgatggcattgtcaaggaggtcgtcctcagccccacagcaaca
ttttacagcatgtctccgctgacttcctccacagagtacacagtcaaactgcaggccatc
gctgggccgaagagaagcagaatcatctctacagtcttcaccaccatcggagtgctgtac
aagcttcctaaagactgctcgcagactctgttaaatggagaaacaacctcaggcctgtac
acgatttacctgcgtggagatgagtctcagcctctgcaggtctactgtgatatgaccact
gatggagggggctggattgtttttgtgagacggcagagcggtaaagtggagtttttcaga
aactggaagaactacactgcaggctttggcgacctgaatgatgaattctggttgggactc
tctaacctgcataagatcacctcctctgggcagtatgagctgcgtgtggacctcagagat
aagggcgagtctgcgtatgcgcagtatgacaagttttcagtctctgaaccacgcagtcgc
tacaaagtgcatgttggaggatacagcggcactgcaggtgactcaatgacttatcaccat
ggccgtccattctcaacctacgataatgaccacgatatagcggtcacaaactgcgctctg
tcttataagggggctttctggtacaagaactgtcatcgagtgaatataatgggccgatat
ggagacaacagtcatagcaagggtgtgaactggttccactggaagggtcatgagcattcc
atcgagtttgcagaaatgaagatcaggcccaccaacttcaggaattttgagggaaggaga
aagcgatcgtaa
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