Carassius gibelio (silver crucian carp): 128011094
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Entry
128011094 CDS
T08819
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128011094
04517 IgSF CAM signaling
128011094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128011094
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
L1 family
128011094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
V-set
C2-set_2
Ig_PDGFR_d4
Ig_4
FN3_DSCAM-DSCAML_C
Ig_5
A9CJY8-like_N
Bravo_FIGEY
Syndecan
Orf78
Motif
Other DBs
NCBI-GeneID:
128011094
NCBI-ProteinID:
XP_052449135
LinkDB
All DBs
Position
B23
Genome browser
AA seq
1091 aa
AA seq
DB search
MRALKCWRIPAILTILQQTWILAMEIPPDVRQPPMIFKESPQDYIVDPVDPITVECEATG
NPPPVFTWTRNGVYLNVARDPQVSMKWRSGTLQIFFWGRPDDYEGVYQCTATNEFGSALS
SYINLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMAPIRQDRRV
SKAENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTAPKFLKP
KGTASTTIALLGEELVLECFAAGVPTPSIKWIKDWEEMSMTGKKLENFNKTLRIKNVSMD
DGGDYICTASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDSGSIVCSADGIPRPQIQ
WLVNGEPISDAPKSPGRQVSGDTLTFRAVVPDSAAVFQCNASNQYGYIMANAFLAVMDMK
PRLLGPRDELIKTTEGNHTHLDCPYFGSPKPALRWSKGGLGPLEGGRHRILPNGTLEIRN
TKLQDQGSYVCVASNVIGRDEKEVQLEVKEPIKIIRAPHNTVVIRGSLARFDCKIKFDQT
LDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGVYTCRVKSELEEVTASAKLTVM
DRPDPPSDLEISDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLLPSGWKNLSS
YPGSLNSVILQLTPFVEYRFRVIAVNGIGPSKPSWPSEYYQTGGAVPDAIPRNIQGMGSG
VFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIIYDTDTFTPY
EIKVQAVNFFGYGPESPVVIGYSGEDRPVAAPSDLGVSDVESSTLTVHWEPVARADIMGE
IKEYKVYYWRESSRLPWHTVSRRIKTKSFKANGPRLSGTLTGLVPYSNYKMYIVVANNRF
EGPPSNTIEFQTPEGVPSIPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKYQSLNVS
LGDRIQVEYIPPNITYFSLRRSDRYTRYKFSLAAQTEAGVGEAFTEESPHFTTEEYTRDQ
VDIVTQGWFIGLMCAVALLVLIMLIVFFIKRSRGGKYPVRDKRDFALEQLDDRENGTFDY
RSLERYDSCHF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctgaagtgttggaggattcctgccatacttactatcctacagcaaacatgg
attttagccatggaaattcctcctgatgtcaggcagcctccaatgatttttaaagaaagt
cctcaagactacatagtagatccagttgaccctattactgtggagtgtgaagcgacaggg
aatccacctccagtcttcacatggacacgtaatggagtgtacctgaatgtggctcgagat
cctcaggtcagcatgaagtggcgttctggcacattacagattttcttctggggtcgtcct
gatgactatgagggtgtctatcagtgcacggcgactaatgagtttggctcagctctatcc
agttacatcaacctgcgtgtctccaaggcccgtacctggttgaaggagtatctggagccg
gtctcagtagttgttgggcttcctctcatccttccctgcaatcctcctgtaggtcctcca
aaaccggacacttactggctgaacagcaccatggcaccaatccgtcaggaccgtcgagta
tcaaaggcagagaatggagatctgtacttctccagtattgtagcagaagatgctcttaca
aactatgtgtgtgtcgcgcgcttccccttcacaaacaccatccagcagaaaccgcccctc
atcctgcaggtgctcacagctcgaatggcagcccatactgcacccaagtttctgaaacct
aaaggaactgccagtacaaccattgcattgctgggggaagagcttgttttggagtgtttt
gctgctggagttccaactccctccatcaaatggattaaagattgggaggagatgtccatg
acaggaaagaagttggagaactttaataagacgctaagaataaagaacgtctctatggat
gatggaggagactacatctgcaccgcttcaaacaggatgggcagcctggaccacgtcatc
actgtcagggtcaaatcggttccgttctgggtggagaagcctgagagtctggttttgtct
cgtgatgacagtggtagtatagtgtgtagtgctgatggaattcctcgaccacagatacag
tggctggttaatggagagccaatcagtgatgctcctaagagtccaggcagacaggtttca
ggagacactttgacgttcagggctgtggttccagacagcgctgctgtgttccagtgcaat
gcttcaaaccagtatggctatatcatggcaaacgctttcttggctgtaatggatatgaaa
cctcgcctgttaggtcccagagatgaactcattaaaacaaccgaaggcaatcatactcat
ttagactgcccatattttggctctccgaaacctgccctgcgttggtcaaaaggaggactc
ggtcccttagagggaggtcgtcataggattcttccaaatggtacactggaaatcagaaat
acaaagctacaagatcagggaagctatgtgtgtgttgcaagcaatgtcattggacgagat
gagaaggaggtccaactagaggtcaaagagcccattaaaatcatccgtgccccacacaat
actgttgtcataagaggaagtctggctcgctttgattgtaagattaaatttgaccaaact
ctggatgtcaccgttacttggcttaaggacaagaagttcttgatcttaggaaggaggatg
accaaggatgaggattctctgagcattgctgatgtgtacagacgagatgaaggcgtctac
acctgcagggttaaaagtgaactggaagaggtcactgcctcagccaaactcactgtgatg
gatcgtccagacccacccagtgacctagagatatcagacccatcagagaggagcgttaga
ctcacctgggtaccaggactgagcaaccacagtcctattaaagagtacctggttcagtat
actgaagatctccttgcagactattggctgctgccaagtggctggaagaacctgtccagc
tacccaggaagcctgaactctgtcattttacagctgacaccgtttgtagagtacagattc
cgggtcatcgctgtcaacggtataggtcccagtaaacccagctggccatctgaatactac
cagacaggaggagctgtgcctgatgccatcccaaggaacatccaaggaatgggaagtgga
gtgttcagaaataacatggagatcagctgggagccactagagtacagagaatggaatggg
ccgaaactgggctacatggtttggtggagacgaagggattcaagggaagagtggaagaac
tacacaacatactggtggtgtagctacatcatctatgacactgacaccttcacaccctat
gagattaaagttcaggccgtcaacttcttcggctatggcccagaatcccctgttgtgatt
ggctactctggggaggaccgtcctgttgctgctccatctgacctgggagtgtcagacgtt
gagagctcaacgctgacagtccactgggaaccagtggcacgagctgacatcatgggtgaa
ataaaggagtacaaagtttattattggagagagagcagtcgcctgccctggcacactgtg
agcaggaggattaagaccaagagtttcaaagctaatggacctcgtctgtctgggacccta
accggtcttgtaccatatagtaactacaagatgtatattgtagtagccaataatcgcttt
gagggtccgcccagcaacaccattgagtttcagacacctgaaggagtgccctcgattccc
agatcattcagaatcatgcaccggcactatgacaccatttacctggactgggaagaacct
gcagaacccaatggcattctgaccggatatatcctcaaatatcagtcattgaacgtctct
ctgggtgacagaatccaggttgaatacattcctccgaacatcacctacttctccctgcgg
cgatctgaccgttacacgcgatacaagttctcactggcagcacaaaccgaggctggagtc
ggggaggcattcacagaggaatcaccccattttacaactgaggaatatacccgggatcaa
gtggacattgtgacgcagggttggttcattggcttaatgtgtgcagtcgctctccttgtt
cttatcatgctcatagtctttttcatcaagaggagccgaggaggaaagtacccagtgcgg
gacaagagggactttgcattggagcaactggatgatagagagaatggaacgtttgattac
aggtctcttgagaggtatgattcgtgtcatttttaa
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