Carassius gibelio (silver crucian carp): 128011094
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Entry
128011094 CDS
T08819
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128011094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128011094
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
L1 family
128011094
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
C2-set_2
Ig_4
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Bravo_FIGEY
A9CJY8-like_N
Syndecan
Orf78
DUF3792
Motif
Other DBs
NCBI-GeneID:
128011094
NCBI-ProteinID:
XP_052449135
LinkDB
All DBs
Position
B23:13262461..13276647
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AA seq
1091 aa
AA seq
DB search
MRALKCWRIPAILTILQQTWILAMEIPPDVRQPPMIFKESPQDYIVDPVDPITVECEATG
NPPPVFTWTRNGVYLNVARDPQVSMKWRSGTLQIFFWGRPDDYEGVYQCTATNEFGSALS
SYINLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMAPIRQDRRV
SKAENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTAPKFLKP
KGTASTTIALLGEELVLECFAAGVPTPSIKWIKDWEEMSMTGKKLENFNKTLRIKNVSMD
DGGDYICTASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDSGSIVCSADGIPRPQIQ
WLVNGEPISDAPKSPGRQVSGDTLTFRAVVPDSAAVFQCNASNQYGYIMANAFLAVMDMK
PRLLGPRDELIKTTEGNHTHLDCPYFGSPKPALRWSKGGLGPLEGGRHRILPNGTLEIRN
TKLQDQGSYVCVASNVIGRDEKEVQLEVKEPIKIIRAPHNTVVIRGSLARFDCKIKFDQT
LDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGVYTCRVKSELEEVTASAKLTVM
DRPDPPSDLEISDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLLPSGWKNLSS
YPGSLNSVILQLTPFVEYRFRVIAVNGIGPSKPSWPSEYYQTGGAVPDAIPRNIQGMGSG
VFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIIYDTDTFTPY
EIKVQAVNFFGYGPESPVVIGYSGEDRPVAAPSDLGVSDVESSTLTVHWEPVARADIMGE
IKEYKVYYWRESSRLPWHTVSRRIKTKSFKANGPRLSGTLTGLVPYSNYKMYIVVANNRF
EGPPSNTIEFQTPEGVPSIPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKYQSLNVS
LGDRIQVEYIPPNITYFSLRRSDRYTRYKFSLAAQTEAGVGEAFTEESPHFTTEEYTRDQ
VDIVTQGWFIGLMCAVALLVLIMLIVFFIKRSRGGKYPVRDKRDFALEQLDDRENGTFDY
RSLERYDSCHF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctgaagtgttggaggattcctgccatacttactatcctacagcaaacatgg
attttagccatggaaattcctcctgatgtcaggcagcctccaatgatttttaaagaaagt
cctcaagactacatagtagatccagttgaccctattactgtggagtgtgaagcgacaggg
aatccacctccagtcttcacatggacacgtaatggagtgtacctgaatgtggctcgagat
cctcaggtcagcatgaagtggcgttctggcacattacagattttcttctggggtcgtcct
gatgactatgagggtgtctatcagtgcacggcgactaatgagtttggctcagctctatcc
agttacatcaacctgcgtgtctccaaggcccgtacctggttgaaggagtatctggagccg
gtctcagtagttgttgggcttcctctcatccttccctgcaatcctcctgtaggtcctcca
aaaccggacacttactggctgaacagcaccatggcaccaatccgtcaggaccgtcgagta
tcaaaggcagagaatggagatctgtacttctccagtattgtagcagaagatgctcttaca
aactatgtgtgtgtcgcgcgcttccccttcacaaacaccatccagcagaaaccgcccctc
atcctgcaggtgctcacagctcgaatggcagcccatactgcacccaagtttctgaaacct
aaaggaactgccagtacaaccattgcattgctgggggaagagcttgttttggagtgtttt
gctgctggagttccaactccctccatcaaatggattaaagattgggaggagatgtccatg
acaggaaagaagttggagaactttaataagacgctaagaataaagaacgtctctatggat
gatggaggagactacatctgcaccgcttcaaacaggatgggcagcctggaccacgtcatc
actgtcagggtcaaatcggttccgttctgggtggagaagcctgagagtctggttttgtct
cgtgatgacagtggtagtatagtgtgtagtgctgatggaattcctcgaccacagatacag
tggctggttaatggagagccaatcagtgatgctcctaagagtccaggcagacaggtttca
ggagacactttgacgttcagggctgtggttccagacagcgctgctgtgttccagtgcaat
gcttcaaaccagtatggctatatcatggcaaacgctttcttggctgtaatggatatgaaa
cctcgcctgttaggtcccagagatgaactcattaaaacaaccgaaggcaatcatactcat
ttagactgcccatattttggctctccgaaacctgccctgcgttggtcaaaaggaggactc
ggtcccttagagggaggtcgtcataggattcttccaaatggtacactggaaatcagaaat
acaaagctacaagatcagggaagctatgtgtgtgttgcaagcaatgtcattggacgagat
gagaaggaggtccaactagaggtcaaagagcccattaaaatcatccgtgccccacacaat
actgttgtcataagaggaagtctggctcgctttgattgtaagattaaatttgaccaaact
ctggatgtcaccgttacttggcttaaggacaagaagttcttgatcttaggaaggaggatg
accaaggatgaggattctctgagcattgctgatgtgtacagacgagatgaaggcgtctac
acctgcagggttaaaagtgaactggaagaggtcactgcctcagccaaactcactgtgatg
gatcgtccagacccacccagtgacctagagatatcagacccatcagagaggagcgttaga
ctcacctgggtaccaggactgagcaaccacagtcctattaaagagtacctggttcagtat
actgaagatctccttgcagactattggctgctgccaagtggctggaagaacctgtccagc
tacccaggaagcctgaactctgtcattttacagctgacaccgtttgtagagtacagattc
cgggtcatcgctgtcaacggtataggtcccagtaaacccagctggccatctgaatactac
cagacaggaggagctgtgcctgatgccatcccaaggaacatccaaggaatgggaagtgga
gtgttcagaaataacatggagatcagctgggagccactagagtacagagaatggaatggg
ccgaaactgggctacatggtttggtggagacgaagggattcaagggaagagtggaagaac
tacacaacatactggtggtgtagctacatcatctatgacactgacaccttcacaccctat
gagattaaagttcaggccgtcaacttcttcggctatggcccagaatcccctgttgtgatt
ggctactctggggaggaccgtcctgttgctgctccatctgacctgggagtgtcagacgtt
gagagctcaacgctgacagtccactgggaaccagtggcacgagctgacatcatgggtgaa
ataaaggagtacaaagtttattattggagagagagcagtcgcctgccctggcacactgtg
agcaggaggattaagaccaagagtttcaaagctaatggacctcgtctgtctgggacccta
accggtcttgtaccatatagtaactacaagatgtatattgtagtagccaataatcgcttt
gagggtccgcccagcaacaccattgagtttcagacacctgaaggagtgccctcgattccc
agatcattcagaatcatgcaccggcactatgacaccatttacctggactgggaagaacct
gcagaacccaatggcattctgaccggatatatcctcaaatatcagtcattgaacgtctct
ctgggtgacagaatccaggttgaatacattcctccgaacatcacctacttctccctgcgg
cgatctgaccgttacacgcgatacaagttctcactggcagcacaaaccgaggctggagtc
ggggaggcattcacagaggaatcaccccattttacaactgaggaatatacccgggatcaa
gtggacattgtgacgcagggttggttcattggcttaatgtgtgcagtcgctctccttgtt
cttatcatgctcatagtctttttcatcaagaggagccgaggaggaaagtacccagtgcgg
gacaagagggactttgcattggagcaactggatgatagagagaatggaacgtttgattac
aggtctcttgagaggtatgattcgtgtcatttttaa
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