Carassius gibelio (silver crucian carp): 128011175
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Entry
128011175 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128011175
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128011175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128011175
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
128011175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
128011175
NCBI-ProteinID:
XP_052449280
LinkDB
All DBs
Position
B23:complement(5173426..5178363)
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AA seq
396 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFGGYGKLLEVDLKNGYGFVEFEDTHDADDAVYELNGKEL
CGERVMVEHARGPRRDRDSYGGGGGGGGGGYYGGGGGGGGGRSSGYSSRSRPGRDKYGPP
VRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRRAVEK
LDGTDINGRKIRLVEDKQRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSRSRSRSR
RHRSRSRSGHRSRSKSPSSKSRSRNRKSRSRSRTHKSRSRSTSRKSRSRSDERKSRSKST
SKVKSDRGRSKEKSVSRKSRSRSASPMENGDGDRAKSASRSPSPHAEKSPGKSPDRHSRS
RSKSGSRSKSGSRSKSGSRSKSRSKSRSRSRSASQD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtgtacatcggccgtctgagctataatgtccgcgagaaagacatccagcgg
ttcttcggaggctatgggaagctcctggaggtggatctgaagaacgggtacggcttcgtt
gagttcgaggacacccatgatgcagacgacgccgtgtatgagctgaacggtaaagagctg
tgtggagagcgggtgatggtggagcacgcccggggtcctcgccgggaccgcgacagctat
ggaggaggaggaggaggaggaggagggggttattatggtggaggtggaggtggtggagga
ggacgcagcagtggttacagcagcagaagtcgccctggaagggacaagtatggccctcct
gttcgcactgagtaccgtctcattgtggagaatctgtctagtcgctgcagttggcaagac
ctcaaggatttcatgcgacaggcaggtgaagtgacctacgcagatgcccataaggagcga
gccaatgagggcgtgattgagttccgctcctactctgacatgcggagagctgtggagaaa
ctggatggaacagacatcaatggcaggaagattcgtcttgttgaagacaagcagcgccgt
cgtcgctcctactctggcagccgctctcgttctcgtagccggcgtcgttctcgtagtagg
agtcgccgtagcagccgttctcggagcaactcgagatctcgctcaaggtctcgctctcgc
cggcaccgctcccgttccaggtcgggacaccggtctcgctccaaatctccatcgagcaag
tctcgctcgcgcaaccgtaaatcccgttctcgctcccgcacacacaagtctcgcagtcga
tcaaccagtcgcaagtctcgctcccgctctgacgagcgcaagtcccgctctaagagcact
tctaaagtgaagtcggatcgtggacgctccaaggagaaatcggtcagcaggaaatctagg
agtagatcggcttcaccgatggagaatggcgacggggatcgcgccaagtctgcttctcgc
tctccatcacctcatgctgagaagagcccgggcaagtctccagacaggcattcacgctct
cgctctaagtctggctcgcgctctaaatctggctctcgctccaagtctggctcacgctct
aaatcccgctccaaatcccgctcccgttccagatctgcatcccaagattag
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