Carassius gibelio (silver crucian carp): 128011336
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Entry
128011336 CDS
T08819
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128011336
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128011336
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128011336
NCBI-ProteinID:
XP_052449579
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All DBs
Position
A5:29992913..29995256
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AA seq
297 aa
AA seq
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MYSMLEHDMKSAVPPTHQSAQGMTQLSGGVAHGTAKPTVNNQQQQISDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDY
KYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQTD
ALGYSQQLHRYDLSALQYPSAMATAQSYMNGANSYNPMSYSSTPQQPSPVMSMVKPDQVS
HSPTGVHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgcttgaacacgacatgaagtccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgagcggtggagtggctcacggaaccgccaaaccgactgtcaac
aaccaacaacaacagattagcgatcctatggacaaagttaagaggcccatgaacgcgttt
atggtctggtctcggggtcagaggcgcaagatggcacaagagaaccccaaaatgcacaac
tctgagatcagcaagcgcctgggcgccgagtggaagctgctgacggacgcggagaaacgg
ccgtttatcgacgaggccaagcggcttcgcgcgctgcacatgaaggaatatccagattat
aaatacaaaccccgtcgtaagacgaaacccgtgctgaagaaggacaacccggctgccaag
tatcccctatcagccggcaacttactagcggcagccgcggctcaagggtcaggtggaagc
ccgcggatggacagctacggctggggtcacacaggtggctacactggcatgcagacggat
gctctgggttacagtcagcagctgcaccgctatgatctgtccgccctccagtatccatcc
gccatggccaccgcacagtcttacatgaatggtgccaactcttacaaccccatgtcctac
agcagcactccacagcagcccagcccggtcatgtccatggtgaaaccagaccaggtgtct
cattctcccaccggcgtacacagccaccagcggggtcctttacagggagacctgagggac
atgattagcatgtatatccctggtggagacaccacagacagtggagcacagagaggctat
tccaacatccaacagcattacctcaccggtacagcacctctcactcacatctga
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