Carassius gibelio (silver crucian carp): 128011337
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Entry
128011337 CDS
T08819
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128011337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128011337
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128011337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
128011337
NCBI-ProteinID:
XP_052449578
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Position
B23:16591819..16597584
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AA seq
1169 aa
AA seq
DB search
MIKSLPKDVQAQLRSGVTIFSLQQCVEELILNSIDAGATCVAVKIDIEACKLQVIDNGTG
MCQEDMERVGLRYNTSKCSSLEDLENLRFYGFRGEAISSIVSLAEMVEISSRTKLSVKTY
VKTFNETNALDVVEAQAIRPSTGTTVSVYNLFHNMPVRRKRMDTVLETERIRQRVESISL
MHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLSRAQKLGEVNYVHKQFEMTGHIG
REGHYNNSLQFLFVNGRLLLKTRIHKTLNCLLKRVSSAARQNNSPTAYPITSSPKQRGGC
DLHGVYMLNIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVTEFSMN
GSDGPSSSPVRNAKTPVAIQNLSVDETREEFDALSEKKDNASTADVSGGVQMLEKVSTNT
ETVSSEESEAEKVLQAELSLRPTFADATEINNTCKKDESAVCPNISHYDLPVNNMTGSKN
QKISIIDGKDAEDTLKKFCFPNTISPKKRKLALNDTEEDKHGFYGTNSKTSRAVPCRKLA
LSFETGSLDKFKRLFGKGAEKKQRSTEKTNLLNSASSRKSNVCFEGTTWRLEDLAKPLLR
NTSGAHFLYSSECSAESSSWNKPDKLSLAAKCSYLKQDKRPSSKISRSTDFLTTGNSSFP
FVEDSNFQEGSRELEKSLLEDVLFGSTGTVDSVVHETPIFTLNEPETNSPILEDSHFSNK
NVTSFVGSVNCVDEAIVTSQHDPQCSNTGNEGQTTNQCVETIPMSSSWLAHYDSWLGRLV
YINQVTGLSKYNSPPVEESQVPCTTDVTNMAVSVISRTGFEYRCYPFHTDIVLPFLPKPR
AERALNSEIDSREDAQGPDSLSTLFSEWSNPVFIRPPEVAVDVTSGQAEGLAVKIHNILY
PYRFTKNMIHTMRVINQVDKKFLACLINTTEQEVPESSTNEGNLLVLVDQHAAHERVRLE
GLVTDSYEDDPDTPGKKKLCSSSVIPPLEINVTEEELRLLRSCQAFLRGLALDVSFPKSE
SLNVFLERLPTCFIEKESTELRRGRRSVIKTIAEDYLREHIELLRSTGRVRGMLPLTVHN
VLASQACHGAIKFNDILSKEECCSLVSSLSSCQLPFQCAHGRPSIVPLADLHHLEEPQDL
PKPNLRKLRRMYKSWLLYGKDQSVAQSKT
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtttgcccaaagatgttcaagcacagctgcgctctggcgttactattttc
tcattgcagcaatgtgtagaggagctcattttgaacagcatcgatgctggagcaacatgt
gtggctgtcaaaatagacatcgaggcctgcaagctgcaggtgatcgacaatggcacggga
atgtgccaggaagacatggaaagagtgggtctacgatataacacaagcaaatgcagctcg
ctggaggatctggaaaatctccgcttttatggattcagaggggaagcgatttccagtata
gtctctcttgcagaaatggtcgaaatatcttctaggactaagctttcggtgaaaacatat
gttaaaacttttaatgaaacaaatgcactggatgttgttgaggctcaagccattcgtcct
tccacagggacgaccgtgtctgtttacaatctcttccacaacatgccagttcgaagaaaa
agaatggacactgttttagaaaccgaacgcatccgtcaaagagtggaatccatatctctg
atgcacccttctgtgtcatttacagtgaaaaaagaaaattcagcccacatgatggtacag
ctctctaaaacaagcagtacctattacaggtttgtgcagattcatggcttgagtcgagct
caaaagcttggagaggtcaattatgtccataagcagttcgaaatgaccggtcacattggc
cgtgagggtcattacaataacagcttgcagttcttatttgtaaatgggaggcttcttctg
aagacacgcattcataaaacactcaactgccttttgaagagagtaagcagtgctgccaga
caaaacaacagcccgactgcatatccgataacatcgagccccaaacaaaggggcggatgt
gatctccacggcgtctatatgttgaatatcaaatgtcattactcagagtatgacatatgc
ctcgaaccagccaagtctttgatagagttcaaagactgggataatgtgctcatctgcatt
gaagaaggtgtcaaagcattccttactaaagaaaacctggtgacagagttttccatgaat
ggcagtgacggtccttcaagtagtccagtgaggaatgcaaagactcctgtggcaatacaa
aatctcagtgttgacgaaacacgtgaagagtttgatgcattgtctgagaagaaggataat
gcaagtactgcggacgtctctggtggtgttcagatgttggagaaggtgtcaacaaacact
gaaaccgtctccagtgaagaatcagaagcagaaaaagtgcttcaggctgaattgtctttg
cggcccacgtttgcagatgctacagaaattaataacacctgcaaaaaagatgaaagtgca
gtttgtccaaatataagccattacgatttgccagttaacaacatgacaggaagcaaaaac
caaaagatttcaattatagatggaaaagatgcagaagatactttgaaaaaattctgcttc
ccaaatacaatttctccaaaaaagaggaagttggcgttaaatgacaccgaagaagacaaa
catggtttttatggtaccaactcaaagacttccagggctgtgccatgtcgtaaattagct
ctgtcttttgaaacgggatctcttgacaagttcaaaaggttgtttgggaagggcgctgag
aaaaaacaacgaagtacggaaaaaacaaaccttttgaattcagcgtcttctcgaaaatcc
aatgtctgctttgaaggaactacttggcgtttagaagatttagccaagcctttattgagg
aacacatcaggtgctcattttctgtatagttctgaatgttctgctgaatcttcatcatgg
aacaagccagacaaactgtcattggctgccaaatgttcctatttaaaacaagacaaaagg
ccatccagcaagatcagcaggagtacagactttcttactacgggaaattcatctttccca
tttgtggaagactcaaactttcaagaagggtcccgtgaattagaaaaaagcctcttagaa
gatgttttatttgggtccactggaacggttgattcagttgtccatgaaactccaatcttc
accctaaatgagccggaaacaaattcccccattttagaagactcacacttctccaacaag
aatgtaacttcctttgtaggaagtgtgaactgtgttgatgaagccatcgtaacctctcag
catgatcctcagtgcagcaacacaggaaatgaaggtcagactacaaatcaatgtgttgaa
acaatcccaatgtccagcagctggctggctcattatgacagttggttaggaaggctggtt
tacatcaaccaagttacagggctcagcaaatacaactctcctcctgtggaggagtctcaa
gtgccatgtaccacagatgtcactaacatggcggtcagtgttatttcaagaacaggcttt
gagtacaggtgttatccatttcacacagacattgtacttccctttctgcccaagcccaga
gcagaaagagcccttaactcagagatagacagcagagaggatgcccaaggtcccgattca
ctatcgactttattctcagaatggagtaacccagtgttcatacggcctccagaggttgct
gtggatgtaaccagcggtcaagctgagggtcttgctgtaaaaatccacaatattctttac
ccctaccggtttaccaagaatatgatccacacaatgagagtcatcaatcaagtggacaag
aagttccttgcttgcttgataaacacaacagagcaggaagtccccgaaagcagtacaaat
gaaggaaatcttctagtgttggttgatcagcatgctgcccatgaaagagttcggctggag
gggttagtgacagactcctatgaggatgacccagacacacctggaaaaaaaaagctgtgt
tcttcaagtgtaatcccacccttagagattaacgtaaccgaggaggaattgagacttctg
aggtcttgtcaggccttcctgaggggtctcgctttagatgtaagtttcccaaagagtgag
tcactgaatgtgtttttggagagacttccaacatgtttcatagagaaagaaagcacagag
ctccgccgtggcagacggtcggtgattaaaaccattgcagaggactatctgcgagaacac
attgagcttctccgctcaacaggaagagtgagaggaatgctgcctctgacagttcataat
gtgctcgcctcacaagcttgtcatggagcaattaagttcaatgacattttgagtaaagag
gagtgctgtagtctggtgagctcgctctcttcttgtcagcttcccttccagtgtgctcac
ggaagaccttcaatcgtccctttggctgatcttcaccacctggaagagccacaggatctt
cccaaaccaaatctgaggaaattgagaagaatgtacaagtcatggctgctctatggaaaa
gatcaatctgttgcacaaagcaaaacatga
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