Carassius gibelio (silver crucian carp): 128011373
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Entry
128011373 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128011373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128011373
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128011373
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128011373
NCBI-ProteinID:
XP_052449664
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Position
B23:complement(2202045..2212222)
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AA seq
642 aa
AA seq
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MATNNTKNTDGQVVTELNEITTNDKPKAEDVKPEKKKKDIPDRETWGGRFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTELPWTSCNKPWNTDRCYTNYSIVD
TTNLTSAVMEFWERNVHQMTDGLEKPGEIRAPLAITLAIAWVLVYFCIWKGVSWTGKVVY
FSATYPYFMLFILFIRGVTLPGAKEGIMFYVTPDFEKLKESEVWLDAATQIFFSYGLGLG
SLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMAHVTKRSIADVAASGP
GLAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRLLRKRRE
IFIACVCIVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNRFY
DNIQEMIGYKPCLWWKLCWVFFTPLIVAGVFLFSAVQMVPLTMNNYVFPKWGQGVGWLMA
LSSMVLIPGYMVYMFLTLKGTYKERIRIMLQPPAVKRAQENGPEQQQLQTQPQHPEQSLQ
QSPPLVQQPDPVPQPPQSPQALQQPPQADSSSSTNPGNDANV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaacaacaccaaaaacaccgatggacaagttgtgacggaactcaacgagatc
acaactaacgacaaacccaaagcggaggacgtcaaaccagagaaaaagaagaaagacatc
ccagacagagaaacttggggtgggagatttgattttctcctgtcatgtgtgggctacgcc
atcggactgggcaatgtgtggagatttccttatctgtgcgggaaaaacggcggaggggct
ttcttgattccttattttttgacgcttatttttgctggagtccctctattttttcttgaa
tgcgctcttggacaatacacatccattggcggccttggggtttggaaactagctccaatg
ttcaaaggtgttggtcttgcggctgctgttctctcattctggctgaacatttactacatt
gtcatcatttcctgggcaatttactacttatacaactcctttaccactgagcttccatgg
acatcttgtaacaaaccatggaacacagacagatgttatacaaactacagcatagtagac
accaccaatctcaccagcgctgtcatggagttttgggaacgcaatgtgcatcaaatgact
gatggcttagaaaaacctggtgaaattcgtgcgccacttgcaataacactggccattgcc
tgggtccttgtgtacttctgtatctggaaaggtgttagctggactggaaaggttgtttac
ttctctgccacctacccatacttcatgttgttcattttgtttatccgtggagtgaccctg
cctggggctaaagagggaatcatgttctatgtcactcctgattttgagaagctgaaggag
tctgaggtttggctggatgctgcaacacagattttcttctcctatggtttgggtctaggc
tctcttattgctctgggcagctacaaccctttcaataacaatgtgtacagggattctatc
attgtgtgctgtataaattccttcacaagtatgtttgctggatttgtgattttctctatt
gtgggcttcatggcacatgtgacaaagagatccatagctgatgtagctgcatcaggtcct
ggtttggcatttttagcttatccagaagctgtgacgcagttgcccgtctcaccactgtgg
gctattctcttcttttccatgctgctgatgctgggaatcgacagtcagttctgcacagtg
gagggcttcatcactgctctggtggatgaattcccacggctgctcaggaaaagaagagag
attttcattgcatgtgtttgcattgtatcctacgccattgggctgtccaatatcacacag
ggtggcctctatgtgtttaagctctttgactattactcagccagtggaatgtgtctgctc
ttcttggtgttctttgagtgtatctcaatctcctggtgctatggtgtgaacagattttat
gataacatccaggaaatgattggatacaagccttgtctatggtggaaactgtgctgggtt
ttcttcacccctctaattgtcgctggcgtgttcctcttcagcgcggtgcaaatggttcct
cttacaatgaacaactatgtgttccctaaatgggggcaaggagtaggctggctcatggct
ctgtcctctatggttctcatacctggttacatggtctatatgttcctcaccctgaaggga
acatataaagagcggatcaggataatgctgcagcctccagcagtcaagcgtgctcaggag
aatgggccagagcaacagcagttgcagacacagccacagcacccggagcaatcactgcag
caatcaccgccactagtgcagcaacctgacccagtaccacagccaccacaatcaccacaa
gcactgcaacaaccgccgcaggctgatagttcctcttcgactaaccctggcaatgatgcc
aacgtttaa
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