Carassius gibelio (silver crucian carp): 128011394
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Entry
128011394 CDS
T08819
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
128011394
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
128011394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA
AAA_22
AAA_15
AAA_29
AAA_16
RsgA_GTPase
Fer4_2
AAA_23
Fer4_10
NACHT
nSTAND3
Fer4_4
TsaE
Fer4_21
ORC-CDC6-like
AAA_30
Fer4_16
Fer4_9
Fer4_7
SRP54
Fer4_3
AAA_19
Motif
Other DBs
NCBI-GeneID:
128011394
NCBI-ProteinID:
XP_052449679
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All DBs
Position
B23:complement(25360334..25371147)
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AA seq
599 aa
AA seq
DB search
MADKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGRFDAPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGSVGSILSRKDDTKTEELVCEQLDLLHLRERNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLRAAITIRSLISPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETAAEEEVKKMCRYQYPNMKKSMGEF
TLGITEGEFTDSEIMVMLGENGTGKTTFIRMLAGGLKPDGGGEVPILNVSYKPQKISPKF
KGSVRALLHEKIRDAYTHPQFVTDVMKPMQIESIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
RNTNANAPQNLLAGMNKFLAQLEITFRRDPNNFRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaacaccagaatcgctatcgtgaaccacgacaagtgcaagcccaagaaa
tgtcgtcaggagtgcaagaagagctgtccggtggtgcgcatgggtaagctgtgcatcgag
gtcacgcctcagagtaaaatcgtctggatctcagagtctctctgcatcggatgtggaatc
tgcatcaagaaatgcccatttggcgctctgtcgatcgtgaacctgccaagcaacctggag
aaggagaccacacacagatactgtgccaactccttcaagctccacaggttgcccatccct
cgtccaggtgaagtgctggggctcgtgggtactaacggcatcgggaaatccacggccctc
aaaatcctggctggaaaacagaaaccaaacctggggaggttcgatgctcctcctgactgg
caggagatcctcgcatatttccgtggctccgagctgcagaactacttcaccaagatcctg
gaggacgacctgaaggccatcgttaagccgcagtatgtcgatcagatccccaaaaccgtt
aaggggtcagtaggctccatcctgagcaggaaggacgacaccaagacagaagaactggtg
tgtgaacagctggatctgttgcacttgcgtgagcgtaatgttgaggatctgtctggagga
gagctgcagagattcgcctgcgcagtcgtctgcattcagagagctgatatcttcatgttc
gacgagccgtccagttacctggatgtgaaacagaggctgagagctgccatcaccatccgc
tccctcatctctccagacaggtacatcatagtggtggagcacgacttgagtgtgttggat
tacctgtcagacttcatctgctgtctgtacggcgttcccagcgcgtacggtgtggtgacc
atgcccttcagcgtccgggaaggaatcaatattttcctggacggctacgtgccgacggag
aacctgcgcttcagggagacgtctctggtgtttaaagtggcggagacggccgccgaggag
gaagtgaagaagatgtgccgctatcagtaccccaacatgaagaagagcatgggcgagttc
acgctgggcatcacagaaggagagttcaccgactcggagatcatggtcatgctgggagag
aacggaactgggaaaaccacgttcatcaggatgcttgcaggaggcctcaaaccagacgga
ggaggtgaggtgcccatcctgaacgtgagctacaagccacagaagatcagccccaagttc
aaaggcagtgttcgagccctgctgcacgagaagatcagagacgcgtacacacaccctcag
ttcgtcacggacgtaatgaagcccatgcagatcgaaagcatcatcgaccaggacgtccag
aatctgtctggtggtgagctgcagcgtgtggctctggctctgtgtttaggaaagcctgcg
gacgtgtatctgatcgacgagccgtcagcgtatctggactccgagcagcgtctgatggct
gccagggtcatcaaacgattcatccttcacgccaagaagacagcgtttgtggtggagcac
gacttcatcatggccacttatctggccgaccgagtcatcgtcttcgatgggattccatcc
agaaacactaacgccaatgctccacagaacctgctggctggcatgaataagtttttagcg
cagctggagatcacgttcagaagagacccaaacaacttcagaccaagaattaacaaactc
aattccattaaggatgtggaacaaaagaagagtggaaactacttcttcctggatgactga
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