Carassius gibelio (silver crucian carp): 128011570
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Entry
128011570 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128011570
03036 Chromosome and associated proteins [BR:
cgib03036
]
128011570
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
128011570
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128011570
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128011570
UBL E3 ligases
128011570
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128011570
Cilium and associated proteins [BR:
cgib03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128011570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-RING_6
zf-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
128011570
NCBI-ProteinID:
XP_052450083
LinkDB
All DBs
Position
B23:26571484..26577735
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AA seq
948 aa
AA seq
DB search
MMAPSKMKLRVRKRDSASRSSQRLLANASPDSKCPICLDGFKNVASLDRCLHQFCFRCIH
EWSKNKAECPLCKQPFHSIFHSVKGENDFKEFVLRPPENGAPVNADPPERVLRPRVLRGR
ERRSHRAQNPAPSSSPPLEDDVMFDGLTDAAALAGNQDVQQMVLRLTARRHGRGEGRSLR
RLRDQDVVAFRRALYRTGVRVRNSRDAGRQRDISATFLRQNPGCLRRLLPWLQRELTVLY
GSHGSLVNIVQNIIISRIMNYNMEDSAIRDELRPFLLARTDHFLHELVSFARSTLNMEAY
DQQAVYDCPAPSYEEGSSSDLSVIAISEDDDDNDSEDNVTENPSAVQERLASVATASGAE
SLPSQSAWDDETPGPSYSTLLPSSSLSQDEGAEPITSTAPPLSALDMTDPVTSGRVSAGP
GEDDVEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEPATTETMASVMKSEASQMQLPL
QSHMNPISPSSSPSPAPLCSPQHLLSDGVGSHSIEQETDYLSPRGHRSKDGSHSRQSRDD
FRFRGHKRHRSHRRSGSKEREKSLAQPRGIKTPDCSPSQTRSWTQSPEVSVWSCSPVSKS
HSSDCSPSRNKSGEHSCHTRERFSHSPSNSRRKRTKEKRTRSPDLDWFPGLDGSHRICEA
KRCRKRRKRSVSSSSADSHSERSCLDKPSGKRKYKTRHLERAAQRQHKEGTTSKEKRHRE
RRRSRERSPSVEIIYERGPPDPYCVQRRKKKHRKRRKELRSPTVITIDSDSDRTIDCLDR
VMDVTDQTAADVEQRDETPEQDPIQNASFTLDSSNPQSEPSSPMSRGDPTTEPTLNLDDC
VVDVVDHSSSDCSRNMGSSNHGGFIPDPFPVDSTMMAPPSDVRLLETILKDLVDILPETE
QEIEPRSPGQQEHAFSQRKDQSETRRDVENLENTDGSGPKESPTKTAS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgccttctaagatgaagctgcgtgtgaggaagagagacagcgctagcagatct
tctcagcgtttattagccaacgcttcgcctgattccaaatgccccatctgcctcgacggc
ttcaaaaacgtggcgtcgctggaccgctgcctgcatcagttctgtttccgctgcatccac
gagtggtccaagaacaaagccgagtgtccgctctgtaagcagcccttccactccatattc
cactccgtcaaaggggaaaacgactttaaggagttcgtgctgcgtccgccggagaacgga
gcgcctgtgaacgccgatccgccggagcgtgtgctccgcccccgagttctccgaggccgt
gagaggcggagccacagagcgcaaaaccccgccccttcctcatcccctccgttagaggat
gacgttatgttcgatgggctgacggacgcagcggcgctcgcggggaaccaagacgtacag
cagatggtgctgcggttaacagcgcgcagacatgggcgtggcgaggggcggagcttgcgc
cgtttgcgcgaccaagatgttgtggcattccgacgtgcgctttataggactggcgtgcga
gtgcgcaactcgagggatgccgggagacagagggacatttcggctacattcttgcgacaa
aatcccggctgtttgcgacgactgttgccttggctgcagcgcgaactcaccgttttgtac
ggttcgcacggctcgctggtgaacatcgtgcagaacatcatcatctcgcgcatcatgaac
tacaacatggaggactcggccatccgagacgagctccgccccttcctgctggcgcgcacc
gaccacttcctgcacgagctggtgagcttcgcccgctccaccctcaacatggaggcgtac
gaccagcaggccgtctacgactgtcccgctcccagctacgaggagggcagcagctcagac
ctttctgttatcgccatctctgaggatgacgatgataatgacagtgaggacaatgtcacg
gagaatccctctgccgtccaggaacgccttgcatccgttgccacagcaagtggagcagaa
agtttgccaagtcagtcggcgtgggatgatgagacgcctggtccctcctattcaaccctc
ctcccctcttccagcctatcacaggatgagggggcggagccaatcacaagcacagcccct
cccctcagtgccctggatatgactgaccctgtgacgagtggcagagtgtcagctggaccg
ggtgaagatgacgtagaggaagagtgtctgattgtgggatacgtgaaaccaatggccgaa
cggactccagaacttgttcagctctcctcagactcatctgaagaagagcaagagccagcc
accactgagacaatggcatcagttatgaaatcagaggcatcccaaatgcagctcccgtta
cagtcccacatgaacccaattagccctagctcctccccaagccctgctcccttgtgcagt
cctcagcatttactctcagatggagttgggtcacacagcatagaacaagagactgactac
ttgtccccccgtggtcaccggtccaaagatggttcacattcacggcagagtcgagatgac
ttcagattcagaggtcacaagaggcacagaagccatcggcgctctggcagcaaagagagg
gaaaagagtttagcacaacctcgtgggatcaagaccccagattgctcgccaagtcaaaca
cggagctggacacaaagcccggaagtgtccgtgtggagctgtagccctgtctctaagtca
cacagtagcgactgctctccttctcgaaataagagcggagagcattcgtgccatacaaga
gagagattctcacactctccttccaactccagaaggaagagaaccaaggaaaagaggact
aggtcacccgacttggactggttcccaggactcgatggttcccaccgtatctgtgaggca
aagcgttgtcgtaaacgccgtaagcgttcagtcagtagcagcagtgctgattcgcactcc
gaaagatcctgtctggataaacccagtggcaaacgcaagtacaaaacccggcacttggag
cgagcagctcagcggcagcacaaggaaggaaccacaagcaaagaaaagcgacacagagag
cggcgacgaagcagggaacgatctccaagtgtggagatcatctatgaacgagggccgcct
gacccttactgtgtccagcggaggaagaagaagcaccggaagcgaagaaaggaactgcgt
tctcccactgtgatcacgatcgatagcgacagcgaccggaccatcgactgtctggaccgt
gtcatggacgttacagaccaaaccgcagctgatgtcgaacagagggatgagactcctgag
caagatcccatccagaacgcaagttttaccttggactcttcaaatcctcaatccgagcct
tcgagtcccatgagccgaggcgaccccaccactgaacccacactcaacctggatgactgc
gtggtggatgtagtcgaccacagtagctccgactgctcccgaaatatgggttccagtaac
cacggagggtttatacccgaccctttcccagtggattcaacaatgatggccccaccttcg
gatgtgaggctgctggaaaccatactgaaagatcttgtggatatcctaccggaaacagag
caggaaatagagcctagatctcccggccaacaagaacacgcttttagccaacgaaaagac
caatcagagacgagacgagatgtggagaacttggagaacaccgatgggagcggaccaaaa
gagtcgccgaccaaaactgctagctag
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