Carassius gibelio (silver crucian carp): 128011601
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Entry
128011601 CDS
T08819
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128011601
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128011601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
128011601
NCBI-ProteinID:
XP_052450162
LinkDB
All DBs
Position
B23:11465732..11515856
Genome browser
AA seq
1779 aa
AA seq
DB search
MTKTKVDTGSPTHFVSSKEKRQKQKMESSTGEQEQPQPSQQQPAQPLQVTERKKIHRAPS
PARPKDVPGWSLTKIRGGIGTPTLSVKPGAIYLGGRVSRRSPVTGKETKTEKSKPTGKPA
LSAPGAQKSCVKSNKSGRRKVSDASIGSDDLSKDSGCAAGKLSPTDSSSELSDCASEENK
VSTDALSSDTETSSRGGVDGEKAPASGQTKSSVEKERLSLGMETAEGSVSLGDERSLTSV
DSRMPASTSLAFSDLTEELMDGMHEELVREIEELRSENDYLKDEMEELRSEMLEMRDMYM
EEDVYQLQELRQQLDQANKTCRILQYRLKKAERRSIRVAQTGQVDGELIRTLEQDVKVAK
DVSIRLHNELDAVEKKRSRLEQENEELRVKLQDLEVAKQVLQAEMEKARENLKKRGARPN
NKPDKKASPQPPEDSSDLKCQLHFAKEESALMCKKLTKMVKDNEAMREELAKYRSVYGDV
DASLTVEEVAESPHTREAEVKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQDS
PGGAGVMGGVGSQLLSTSENVMELQRHLQFVEEEADLLRRSLIEMEEQNKLLMNELNHYK
SELSAVTEIEPLSSTTLTSPTIIPDASEDGGSGLNEASRKELLAARLQIVELNGKVKKLQ
YENRVLLSNLQRCDLASNQGSTRPTLETDAEAGDSAECVPSQAHREGPVGDEQNDILEEK
NLKVSGTSHIHTAQCLSIKDLLAIRDQALLVTSAIQLLTSPDPSCISPDALYHKITTNES
AEPVLEKSQTQSSMLPLVEALHGRLQSLQAKLQALSERVDALGQTPERERVEGMSLMPQL
SEAEDPAANCPCPPDAQFNQNTTQQKPDSRDQPDCEVKVHPCKAEEESNRHKDSNKDEKS
DLKETNSDLLTEQVCELHALLSEAREKAQGAQEALSQERLARHDDTHKLSQLQEEHQKAL
LRCDFQLQSLSLQTRLQQKLWSQERNLLVQESQQLKESLLLISLKLRWLLKQWRLGKKLD
TESKDILEVNSVKDLHILLEEDGLSSHYGDNKMSAAEEQPLNPTPKEHSLAEKSCPQPGG
FSSTLSDLKVALQDLSAELREERQSSQELTQQFARAKASWEVERMELKSIITQLEGKMGK
ASVAGGEKESPDLKGALKKEREEHQHLLADSYAAVMDLTKQLQISEKNWSRERLELLEHF
NQERSQWEQRLREAQSKGTQALHDKTSEKEISADAATSGSGLQRTKSFSALSEFKCLLDT
SLFLPGHKVSGVPECNVPQHQTTAPASILARTDLSDLNRKNWKYLTNDSSMLEKGDQFKT
WDCPSTNSNSSFPGLELSKEYIQRSYTAPDKTGIRIYYSPPTVRRMERRPVKEKAKQDPQ
QGPSSRDTAMIDPSGQTAASAPLSTTSSSTYEQWFSSLSQQHRDLLEGRTGGSTPFHGLE
ISGNLSDDMKEMTNCVRQAIRSSSLERKCSKDTGSQTVGVSSTGTQTAQFVSIGLQTDGP
FPTARGLQGKAWSPRPSTSLSSARSRQISTSLEKVHSRIDRPCCSPKYGSPKLTRRVSTS
SSKLETSSTSSRDRSVWNLHNRSGSQSGSAWARSTTTRDSPVLSGLNDGLTSLFSVVEHS
GSVESLWKADPCSGRQAAGKPSYPSIGIGLGEAGAQKYGMVQEFLHNVCGRTVPADSMDE
PKPECLPGALIGADNITKIVNKRFMKTQREEFVATGKDAMSSSSSTLEDSVCDCSSQTAT
SCFARHSRSITRHAHGQCKHRVQESPMGTEERFDASNEL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaaggttgacaccggttccccgacgcattttgtctcgtcgaaggagaag
aggcaaaagcagaaaatggagagcagcactggagaacaagagcagccgcagccgtcacaa
cagcagcccgcgcagccgctacaagttaccgagagaaagaaaatacaccgggcaccgtct
ccagcgagacccaaggatgtgcccgggtggtccctcacgaaaatccgcggcggtatcggc
acgccgacgctgagcgtgaaaccgggggccatatatttaggtggccgcgtgtccagacgg
agcccggttaccgggaaggagacaaaaacagagaagagtaaaccgaccggcaaacccgcg
ctgtccgcgcccggtgctcagaagagctgcgtgaagtccaataaaagcggtcggagaaaa
gtctcggacgccagcatcggatcggatgatttgagcaaggactccggctgcgctgcgggg
aaactctcccccaccgacagcagctccgagctctccgactgcgcctccgaggagaataaa
gtctccacagatgcgctgagcagcgacaccgagaccagcagccgcgggggggtcgacgga
gagaaagcgccagcgagtggtcaaaccaagagcagcgtggagaaagagcggctctcgctg
gggatggagaccgcagaggggagcgtctctctcggcgacgagcgctcgctcacctcggtc
gacagcaggatgcccgccagcacgtccttggcgttctcggacctgactgaggaattaatg
gacggcatgcatgaggaactagttagggaaatagaggaactcaggtcggagaatgattat
ttaaaggatgagatggaggagcttcgctctgagatgctggagatgagggacatgtacatg
gaggaagatgtgtatcagctccaggagctcagacagcagctggatcaggccaacaaaacc
tgccgcatcctgcagtaccgcctcaagaaggcagagagacgcagcatccgcgtggcccag
accggacaagtggacggggagcttatccgaacactggagcaagacgtcaaggtggccaaa
gacgtgtccatccgtctgcacaatgagctggacgctgtggagaagaagagatctcgtctg
gagcaggagaacgaggagctgagggtgaaactgcaggatctggaggtggccaagcaggtc
ctgcaagcggagatggagaaggccagagagaacttgaagaagagaggtgccagaccaaac
aacaaacctgataaaaaagcatcgcctcagcctccagaagacagttcagacctaaagtgc
cagcttcactttgccaaggaggagtcagctctcatgtgcaagaaactcaccaagatggtc
aaagacaacgaggcgatgagggaggaactggcaaagtatcgctctgtgtacggagatgtt
gatgcctcacttactgtcgaagaggtcgccgaatctcctcacacccgagaggctgaggtc
aaagtccacctgaaactggtggaagaggaggcaaaccttctaagccgacggatcgtggag
ttggaggtggaaaaccgcggccttcgtgctgaaatggatgatatgaagatccaagattcc
ccgggtggagctggcgtcatgggtggagtcggaagtcagctgctttccacgtctgagaat
gtgatggagctgcagcgccacctacagtttgtggaagaagaggcagatctgctgcggcgc
tccttgatagaaatggaagagcagaacaagctgttgatgaatgagctcaaccactacaag
tctgaactttctgctgtcactgaaatagagccgttgtcatccacaaccctcacttcaccc
acgatcatccctgatgcttcggaagatggaggatctggtctaaacgaagccagccgtaaa
gaactacttgctgccaggctacagatcgtagagctgaatggcaaagtaaagaagctccag
tatgaaaaccgcgtgcttctgtccaaccttcaacgctgtgacttggcctccaaccaggga
tccacacgtccaacgctggagactgatgctgaagcaggggactcggctgagtgtgtcccc
agccaggcgcaccgcgaaggcccagttggtgatgagcagaatgatattctggaggagaag
aatctgaaagtttcaggaacaagtcacattcatactgctcagtgcctcagcataaaagac
cttctcgccatccgcgaccaggcactacttgttacctcagccattcagcttctgacatca
cccgacccctcctgtatctcaccagatgccctctatcataagattacgacaaacgagtct
gcagaaccagttctagagaagagccagacccagagctccatgctgcccctggtggaggcc
ctgcatggcagactgcagtcgctccaggctaagctacaggccctcagtgagagggtggat
gccctggggcagaccccggagagggagcgtgtggaagggatgtccctgatgccccagctg
tctgaggcagaagaccctgcagcaaattgcccatgccctccagatgctcagttcaaccag
aacacaacccaacaaaagcctgactctagagaccagccagactgtgaagtcaaagttcac
ccatgcaaggcagaggaggagagcaacagacacaaagacagcaacaaagatgagaaatct
gacttaaaggaaacaaactctgatctgctgacagagcaggtttgcgagctgcacgctctg
ttgtctgaggcgagagagaaggctcagggagcacaggaagcactgtcacaggagagactg
gcacgccacgatgacacacataaactctctcagcttcaggaagagcatcagaaggctctc
ctccgctgtgacttccagctgcagagtctgagtctacagacgcgtctgcagcagaagttg
tggagtcaggagagaaacctcctggtgcaggagtcacagcagctcaaagagagcctgctc
ctcatcagcctcaagctgcgctggctcctcaaacagtggagactcggcaagaaactagac
accgaaagcaaggatatcctagaggttaatagtgtaaaagatcttcatatcctgctcgag
gaagatggcctgtcttcccactatggagacaacaagatgtcagctgctgaggagcagcca
ctcaatcctacacccaaagagcacagcctggcagagaaaagctgtccacagcctggtgga
ttcagcagtactctgtcggacctgaaggtggcgctacaagacctgagcgctgagctgcgc
gaggagcgtcagagttcacaggagttaacacagcagtttgcccgtgctaaagcatcatgg
gaagtcgaacggatggaactcaagagtattatcactcagctggagggtaagatggggaag
gcatcggtggctgggggcgaaaaggagtctccagacctcaagggggcactaaaaaaggag
cgagaggagcatcaacacctgttggcggactcttatgctgctgtgatggacctcaccaaa
caactacagatcagtgagaagaactggagccgagagcggctggagcttctggagcacttc
aaccaggaaagaagtcaatgggaacagcgtttacgagaagcccagagcaaaggcacacag
gctctgcatgataaaacatctgaaaaggaaatctcagcagatgcagccaccagtggttca
ggactgcaaaggaccaaatcattttctgccctctctgaatttaagtgtcttctggacact
agtctgttccttcctggtcacaaggtcagcggagtgccagagtgcaatgttccacagcat
caaactactgctcctgcctccattttggctcgtactgacttaagtgatctcaataggaag
aattggaagtacctgaccaatgattcttcaatgctggagaaaggtgaccagtttaagaca
tgggactgcccaagcaccaactctaacagcagcttccctggactggagttgagcaaggag
tacatccagagaagttacactgctccagataagacgggtattcgcatttattacagccct
ccaacagtgaggagaatggagaggaggccagtcaaagaaaaggccaagcaggatcctcag
caaggaccatcatctagagacacagccatgatagatccatcaggtcagactgctgcatct
gcacctttgtcgaccacttcctcatccacttatgagcagtggtttagctcactttcacag
cagcatagagacctacttgaaggacggacgggaggttctacaccattccacggactggaa
atttcaggcaaccttagtgatgacatgaaggagatgaccaactgtgtgcgacaggccatt
cgttccagttctctggagaggaagtgcagcaaagatacagggagccagacagttggtgtt
tcaagtacaggaacgcaaacagcacagtttgtcagcattggcctacaaaccgacggaccc
tttccaacagctagaggccttcaagggaaagcatggtctcctcgtccatccacctcactt
tcatctgcacgctcccgacagatctctacatctctagagaaagtccacagtcgcatagat
agaccatgttgctcaccgaaatatggctcacctaagcttacccgcagggtctccacctcc
tcctccaaactggagacgtcctcaacatcttcaagggatcgcagtgtatggaatcttcat
aatcgtagtggatctcagagcggttcggcctgggcacgttccaccaccacccgagacagc
ccagtgcttagtggcctcaatgatggcttgaccagtctcttcagtgtggtggaacactcc
ggaagtgttgaatcattatggaaagcagatccatgctctggaagacaagctgctgggaaa
ccttcctatcctagcataggtatcggactgggagaagcgggagctcagaagtatggcatg
gtccaggagtttctccacaatgtttgcggcaggactgtgccagcagactccatggatgaa
ccaaagcctgaatgcctacctggagccttgattggcgcagacaacatcacgaagatcgtc
aataaaaggtttatgaaaacacaaagagaagagtttgtagccactggaaaggatgcaatg
agctcaagctctagtaccctggaggattcagtttgtgactgcagctcacaaactgccact
tcctgttttgcccgccactcgcgctccatcacacgacatgcccatggccagtgcaaacat
cgagtgcaagagtcacccatgggaactgaagaacgattcgatgccagtaatgaattataa
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integrated database retrieval system