Carassius gibelio (silver crucian carp): 128011649
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Entry
128011649 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM7-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128011649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128011649
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128011649
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128011649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_10
ANCHR-like_BBOX
DUF4667
zf_RING_Vps8
zf-UBR
Motif
Other DBs
NCBI-GeneID:
128011649
NCBI-ProteinID:
XP_052450255
LinkDB
All DBs
Position
B23:complement(7764316..7767034)
Genome browser
AA seq
541 aa
AA seq
DB search
MSQSKPEERLALELSCAICLQLYHDPVALPCGHNYCLGCIRNAASAEDRKSPKRCPECRE
EYGSPETLPKNFKLSSIVDGFLVATTGGGLKGGPMVPCDQCLDDPVAAVKFCTRCEMSLC
PGHLKKHEERHRSLHVLVEPSAERDGKRCPVHLKVTEYLCAQERLFLCSECLMEGTHQHH
EVQTFEVAKEEMKRVLEELGKSVSDKLQITEALVKSASEGPTDKAEDKLVARANILLDNM
TSLISSYKSRMSTVMNNELHSRDKSWQASLCDLEGCLHQLQEAQKCTGEVLSQSSEFLFI
QNYLNVEARIRQAVNVTIPALPSQESSNAKQLRSNLRTDAFHAEMSLLLEYLHGLMNPLD
LTFNPATAHPSLLLSGDLKTVKQCAGAKSSTNGDQSERFSTATQVMCTQGFSTGVHMWAV
EVGPGCMWSLGLCYKSIPRKGDHSRLGHNTSSWRLQWKSKKMTACYDSANVAVGEGLVMP
PKKIEVTLDYEGGTMAFHSSGNGGRRQHLHTFSAVFKDTVYPAFAIHSTSEESWITLLSG
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagcaaacctgaagagcgtctagctctggagttgagctgtgctatctgtttg
cagttgtaccatgatcccgtggcccttccttgtggacacaattattgcttgggttgtata
cgaaatgctgccagcgcagaagatcgcaagtccccaaaacggtgcccggaatgcagggag
gagtacggcagccccgagacgcttcccaagaacttcaagctcagcagtatcgtggacggg
ttcctggtggccacgaccggcggcggactgaaaggaggcccaatggtgccctgtgaccag
tgcctggacgaccctgtagctgcggtgaaattctgcacacgctgtgaaatgtcactctgc
cccggccatctaaaaaaacacgaggaacggcaccgctcgctgcacgtcttagtggagccg
tctgcagaacgggatgggaagaggtgcccggtgcacttgaaggtcacggagtacctgtgc
gcgcaggagcgcctgttcctctgctccgagtgcctgatggagggcactcaccagcaccac
gaggtgcagacgttcgaggtggccaaggaggaaatgaagagagttctcgaggaactgggg
aagtctgtgtctgacaagctacagattacagaagctctggtgaaaagtgccagtgaaggt
cccacggacaaggccgaagataaactggtggccagagcaaacatactgctggacaacatg
acttcgcttataagttcatacaagagtcgtatgagcactgtgatgaacaacgagcttcat
tcccgggacaaaagctggcaggccagtctatgcgacttggagggttgtctacaccagctg
caggaagcccaaaagtgcaccggtgaggttctctctcagtcctcagagtttctcttcatc
cagaactacctcaacgtcgaagcaaggatccgccaggctgtaaacgtcaccatccctgct
ctaccttcacaagagtcttccaatgccaagcagctgcgctcaaacctacgtacagacgcc
ttccacgctgagatgagtcttctgttggagtacctccatggcttgatgaaccctctagac
ctgaccttcaacccagccacggcccaccctagccttctgctgtccggcgatctcaaaaca
gtcaagcagtgcgccggagctaagagcagcaccaatggagatcagagcgaacgcttctcc
acggccactcaggtcatgtgcacccagggtttctccacaggagttcacatgtgggcagtg
gaggttggtcctggatgtatgtggtctctgggcctgtgctataaaagcatcccgcgcaaa
ggtgaccacagcaggctgggacataacaccagttcctggaggttgcagtggaaaagcaag
aagatgacggcgtgctacgactcggctaatgtggccgtaggtgaagggctggtcatgccg
ccaaagaagatcgaagtgaccctggattacgaaggaggaactatggctttccacagctct
ggaaatggagggcgcagacaacaccttcatacatttagtgccgtgttcaaggacacggtg
tatcctgcgttcgcaatccactctacttcagaggagtcgtggataactcttctgagtgga
gcttga
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