KEGG   Carassius gibelio (silver crucian carp): 128011816
Entry
128011816         CDS       T08819                                 
Name
(RefSeq) cyclin-T1-like isoform X1
  KO
K15188  cyclin T
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128011816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgib03021]
    128011816
Transcription machinery [BR:cgib03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     128011816
    Brd4/P-TEFb complex
     128011816
    7SK RNP complex
     128011816
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 128011816
NCBI-ProteinID: XP_052450503
LinkDB
Position
B23:21404374..21413008
AA seq 713 aa
MAASFPSLSQNNNKWYFTREQIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDTRSDTYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRGENQLLTVNCAS
YCSVVGTSSPPSSQISNLIMSLPFVLPASKDLAQTSYFMATNSLHLTTFCLQYSPPIVAC
VCIHLACKWSNWEIPVSTDSKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNW
KAAGQTAKKSKGQDGDQSDAIMNMISMASADSTLAGLMSLSGPPSGSSMDSSADDHSTAP
SSQHWQPPAKELPATNELHAPAKMSLSEYRVKHADVLAAQKRNLVNMEASVKQGYATAAQ
ALMNQQRKEKHHHHQQSSSSSSDLNKPSPIVLKIPLDERSERSSIKMRFPVPGQSGSGGH
SSSSSSRGSEQDIKVRIRVPERRSGSGEDGKNRVKRRERSNHHHHHHHHSSSLSTSSSSS
SSQKHSSSASSSGSSKKVSGDPMRMSSSSSSSRKRTHLPDPPSGSHLSKVSKSSRNSFQL
PTLTGVPSHAMGQGSDILPSLSLSHHQGNYSHSKSDKADTNGHNTGSQSNEYQDTFDMLN
SLLSAQGVQPAQPPMFDYRSQYGDYRYSGSARGGTQAPPLPSEPPPSLPPLPK
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcggcttcgttcccttcgctttcgcaaaataacaataaatggtacttcacgcgcgaa
caaatcgaaaacagcccatctcgccgagcgggacttgatcccgacaaagagctctcgtac
cgacagcaagctgctaacctcctgcaggacatgggacagcggctcaacgtgtctcaactt
acaattaacactgccattgtgtatatgcatcggttctacatgatccagtccttcactcgc
ttccaccgtaatgtgattgctcctgcagctctctttttagctgcgaaggtggaagaacag
ccccgcaagctggagcatgtgattaaggtgacccatgcctgtctcaatcctcaggacccg
tcaccagacaccaggagtgatacatacctgcaacaagcccaagacctggtcattcttgag
agcattatactgcagaccctggcttttgagatcaccattgatcatcctcacacacatgtt
gtcaagtgtacccagcttgtgcgaggtgagaaccagctgctcacagtaaactgtgcttcg
tattgctcagtagtgggtacttctagcccaccaagctcacagatttcaaatctgattatg
agccttccatttgttcttccagcgagtaaagacttagctcaaacctcatacttcatggca
acaaacagtctccacttgactacattttgcctgcagtacagtccacccatcgtagcttgt
gtttgtattcatctggcctgcaaatggtccaactgggagattccagtttccacagacagc
aaacactggtgggagtatgttgaccccacggtgacccttgagctgttggatgagctcact
catgagttcctgcagatcttggagaagacgcccagccgcttaaaacgtatcagaaactgg
aaagctgcgggtcaaactgcaaagaaatcaaaaggtcaagatggtgatcagtctgatgcc
attatgaatatgatctccatggcatcggctgacagcacgttggccgggctgatgagcctc
tctggcccaccctccggttcctccatggactcctcagctgacgaccacagcaccgctccc
tcatcccaacactggcagcctcctgcgaaggagctgcccgctaccaacgagcttcacgcg
cctgctaagatgtctctgagcgagtatcgggtgaagcatgcagacgtgctggcggcgcag
aagcggaatttggtgaatatggaggctagtgtgaaacagggatatgccactgccgcccag
gccctcatgaaccagcagaggaaggagaagcaccatcaccaccagcagtccagctctagt
tcctcagacctaaacaaaccctcacccatcgtcctgaagatcccgctggacgagcgatcg
gaacgcagttccataaaaatgcgcttcccagtgccaggccaatccggcagcggggggcac
agcagcagtagcagcagtcgaggatccgagcaggacattaaagtgcggatccgagttcct
gaaaggcgaagtggctcaggagaagatgggaaaaatcgtgtgaaacgcagagagcggtcc
aaccaccatcaccaccaccaccaccactcttcctctttatcaacatcgtcttcctcatcc
tcatcacaaaaacactcgagttctgccagctcatcaggaagtagcaaaaaggtctcaggt
gatcctatgcgaatgagctcttcgtcatcctcatcccgaaaaaggacccacttgcctgat
cctccttctggcagccatctctcgaaagttagcaaatcgtccagaaactcgtttcagttg
ccgacgctcaccggcgtgccctcccacgcgatgggtcaggggtcggacatccttccctcg
ctgagcctctcgcaccatcagggaaactattcgcattccaaatcggacaaagcagacacg
aacggacacaatacgggcagccagtccaacgaataccaggacacgtttgacatgttgaac
tcgctgctcagtgcacagggcgttcagccagcgcaaccgccgatgtttgactatcgctct
cagtacggagactatcggtacagcggtagcgctcgcggaggaacacaggcgccaccttta
ccctcagaaccacctccatctctgccgccactgcccaaataa

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