Carassius gibelio (silver crucian carp): 128012062
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Entry
128012062 CDS
T08819
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00100
Steroid biosynthesis
cgib01100
Metabolic pathways
Module
cgib_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
128012062
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cgib01006
]
128012062
Enzymes [BR:
cgib01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
128012062
Prenyltransferases [BR:
cgib01006
]
Terpene biosynthesis
Squalene/phytoene synthase
128012062
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GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GST_C_8
Motif
Other DBs
NCBI-GeneID:
128012062
NCBI-ProteinID:
XP_052450945
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Position
B23:complement(1679565..1687179)
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AA seq
320 aa
AA seq
DB search
MAVVGGKSAAPFSVIKRSLSLRSVLSGGRRSAQEGRLVTRASHPLRTHRHPSFVCFSCQD
SMSETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLEKKV
PLLQDFHTFLYQPEWSFSESREKDRQVLEDFPTISVEFRNLGQEYREVISDICYRMGVGM
SEFLEKKVSSMQEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGWDTELANSMGLFLQKT
NIIRDYLEDQQEGRAFWPQEAWSQFASRLEDFARPQHLSSALSCLNLLVTDALHHVPDVI
EYLSRLRNQSVFNFCAIPQV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcggcggtaagagcgcagcgccgttctccgtgatcaagcgctcgttgtcg
ctgcgctcggtgctctccggcgggcggcgcagcgcgcaggaagggcggctggtgacccgt
gcttctcacccgctccggactcaccgacacccctcctttgtgtgcttctcctgccaggac
tccatgagcgaaaccctgcggacctgctacgcgtatctgaaccagaccagccggagcttc
gcggcggtgatccaggccctggacggagagctacggcatgcggtgtgtattttctacctg
gttctgcgagctctggacacagtggaggatgacatgagcatcccgctggagaagaaggtc
ccattgctgcaggacttccacacgttcctctatcagccggagtggagcttcagcgagagc
agagagaaagaccggcaggtgctggaggatttccccacgatttcggtggagttcaggaac
ttgggccaggagtatcgcgaagtgatttcagacatctgttaccggatgggtgtggggatg
tccgaattcctggagaagaaggtttcatccatgcaggagtgggacaagtactgtcattac
gtggcgggtctggtggggatcggactgtcccgtctgttttcggcgtcccagctggaggac
gctgaggtgggctgggacacagagctggcaaactccatgggtctgttcctccagaagacc
aacatcatcagagactatctggaggaccaacaggagggaagagccttctggccacaggag
gcctggagtcagtttgcgtcccgtctggaggatttcgctcgtcctcagcacctgagctct
gctctgtcctgtctcaacctgctggtgaccgatgctctccatcacgtcccagacgtcatc
gaatatctgtcccgcctccgcaaccagagcgtcttcaacttctgcgccattcctcaggtc
tga
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