Carassius gibelio (silver crucian carp): 128012891
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Entry
128012891 CDS
T08819
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128012891
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128012891
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128012891
03029 Mitochondrial biogenesis [BR:
cgib03029
]
128012891
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128012891
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128012891
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128012891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF6950
Motif
Other DBs
NCBI-GeneID:
128012891
NCBI-ProteinID:
XP_052451427
LinkDB
All DBs
Position
B24:complement(4266577..4286214)
Genome browser
AA seq
1618 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAVQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGIAVSVMAKIPLLESLTRQSYRESLEKSSSPHPRTSDEDENEDEEVGE
TSTQSAISHKNRKSPSPVSGSGEASSQASFSPQDRLKSSCSLKAALEEEEESPEGGATPS
FNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLSECRETITKLDNQNMKAIK
GLEDRLYALDQMIASCKRLVNEQQELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIM
LTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERV
RVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRECFGKLFR
KSFLRNRLFRGLDSWPSSSFCTRKPRKFDFELPDISLSDLQYLKSCCPSEVQPFLRVPTL
CDFKPLNQHVEVLHQLVQAAQSVDEMSQTITDLLNEQKFSCSQSAQRSTAFTPRSESTTE
ITTTSTKTLSNLSLKAPDCQPLSLPGHLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSL
DLDSLAESPESDFMSAVNEFVIEENLMSPNPISDPTSPEMMVESLYSSVINAIDSKRIHD
TTTLEKENSKIAVLKLSADRYRSAAEESQYNLRKVKEDLYHFRGLVLKEQRDFGCALETM
NIKVQDALDSVRYCHEEELREMRQTDLQSLKDNHEKQIQTLSEELEGNRKIVRDVQRAML
ELEGLVERKEKEISQLESERERSKQELQDLHEQTVRDLEEKISKQGEELKATLLSKDELA
GQLENLHFEIEHGQQKIRQEMEKAEKVHLQELEARLKQLHEAELESLRLEKESALDKLVQ
ENLVKLRDLVDSYSAEVKEREGRLKDLEARITELADTRCRLEVEIALKETEMDEMRLQYE
EAKSTQEEVLRGELTTQTATLQTQIAMLNQQLQQKNEDYEMGLAELRALMRLEKDHCISE
LVDRHEKENTLLRQEFSALKQKSQDAEKDCKERVQKIQRDHQDQIDALQKEKENEKRAFQ
EKEQELKTVIGDLQTENSLLSGRLEQEKVEALQRAEKEKEEAVKAALQEALRDFQLQKEE
TETRLLGQIELLENQLRERQSTDIAGPTVEKTETGMETSAALSLDSGQWTEERALLLGQL
ELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIISDLTEKLKNLAQQQEKDKG
LIETLSEDRASILQEKKQMEEELNRLRSSVLVSSSFFPPNPIPVITEAHGSCGPIRVEVL
SRSTPDPERLASVAVLKDEERVESAVEASMMTVHDNPMLSEEKQRIMILERTLHMKEEEN
KRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSE
SLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgtttcaagtcaacaacggaagcacgttgacatttgacactgaactt
gctgtccaaaccgttttggaccttaaacatgccattcaggccaaatataaaattgcagtc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagtgccggaacggacaccaacccgatcttcttattcaacaaagagatgatcctg
tctgaccgagctccaaccatccccaaaacgaccttctctatagagaatgagatggagctg
aaggtggaggagtcactcatgatgcctgccgtctttcataccgttgcatcccgcactcaa
ctggctgtggaaatgtttgaggttgccaagaagctttgcttgttctgtgagcgtctggtc
catgacgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgactgc
accctatcctatcaaaaactcctcatgaaattcgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcattgctgtctcagtcatggcg
aagattcctctgcttgagagtttgactcggcagagctacagagaaagcttggagaagtcc
agctcccctcacccgagaacctcagatgaagacgagaatgaggatgaagaagtaggagaa
acgtccacccagtccgctatcagccataagaatcggaagtcaccctcgccggtctctggt
tcaggggaagcgtcgtcccaggcgtccttctctcctcaggacagactgaagagcagctgt
agtctaaaagcagcgctagaggaagaggaggagtctccggaggggggagccacaccctct
ttcaatgtcacgctcttggattggatcaatgttcaggacagacctaatgatgtggagtcc
gtagtgaggaagtgttttgactctatcaacaggctcgatccacgaattatccaacccttt
ctatctgaatgccgcgagacgattaccaaattggataatcagaacatgaaggccatcaag
ggtcttgaagaccgattgtatgctcttgaccaaatgatagcaagctgtaaacggttggtc
aacgaacagcaggaacttgctcagggatttcttgccaatcagaaaagggctgaaaacctg
aaggacacctcggtgctgcctgacctgtgtctgagtcacgccaaccagctgatgatcatg
ctgaccaatcacaggaagctactagacatcaagcaaaagtgtaccactgccaaacaggag
ctcgccaacaaccttcaagttcgtctcaaatggtgctgctatgtgatgcttcacgctgat
caggatggagagaagctgcaggctctcctgaggctgctgacggagctgctggagcgtgtg
cgggtggtggaggcgctcagcactgtgccacagatgtactgtctcgctgtagtggaggtg
gtcagacgcaaaatgtttataggacactacagacaatgggccaatgctcttgtcaaggat
gggaaaaacctctatgaggcagaaaaagtaaaaagggaatgctttgggaagctcttcagg
aaatcgttcctcagaaaccggttgtttcgaggactggactcatggccatcctcttcgttt
tgcacccgtaagcctcgaaagtttgactttgagcttccagatatttccctgagtgacctg
cagtatctcaagtcctgttgtccttccgaggttcagcctttcctcagggtccccacacta
tgtgacttcaagcctcttaaccagcatgttgaggttcttcatcagctggttcaggctgcg
cagagtgtggacgagatgtcacaaactatcacagacctactaaatgaacaaaagttttcc
tgtagccagagtgctcaaagatccaccgcatttacacccagatctgaaagcacaactgaa
atcaccactacctccaccaaaactttgtccaatctcagtttaaaagcaccggactgccaa
cccctgtcgcttcctggtcacttggaggacctatcacctgacagcatagatgcccagact
tttgactttgaaaccattgggcatcccaatatggatcctgtattacagcaaggctcgttg
gacttggactcgttggcagaaagtcctgagtcggatttcatgtcagcagttaatgagttt
gttattgaggagaacttgatgtcacctaatcccataagtgatcccacaagcccagagatg
atggtggagtccctttactcctctgtcattaatgcaattgacagcaagcgtatacatgac
actactacacttgagaaggaaaattcaaagattgcagtactcaagctgtcagcagacagg
taccgttctgctgcggaagagtcccagtacaatttgaggaaagttaaagaagacctttat
cactttcgaggtcttgttctgaaagagcagagagactttggatgtgccctggaaacgatg
aacattaaggtccaagacgctctcgacagtgtcagatactgtcacgaggaggagctcaga
gaaatgcgacaaacggatctccagagtttgaaggacaatcatgaaaagcagatacaaact
ctatcggaagagcttgaaggcaatcggaagattgttcgagatgtccagagagcaatgctg
gagttggagggcctcgtggagcgcaaggagaaggaaatatctcagctggagagtgagagg
gaacgctcgaagcaagaacttcaagatcttcacgagcaaactgtgcgggaccttgaggag
aagatctcgaagcaaggtgaagaactgaaagctacattgctgtccaaggatgaactcgct
ggtcagctggagaaccttcactttgagatcgagcacggccaacagaaaatcagacaagag
atggagaaggcagagaaggtgcaccttcaggaactggaggcacggttgaaacagctacat
gaagcagagctggagtctctcagattggaaaaagaaagtgcacttgacaaactcgtccag
gagaacctggtgaagctcagagatctggtggattcctattctgcagaagtcaaggaacgc
gagggacgcttgaaagacttggaggctcgcattacagaacttgcagacacccgctgcaga
ctggaagtggagatagctcttaaagagaccgaaatggatgaaatgagactccagtatgag
gaggccaaaagcacccaagaggaggtgttgagaggagagcttactacccaaacagccacc
ttgcagacacaaatcgccatgttgaaccaacagctccagcagaagaacgaagactacgag
atgggcctggccgagctccgagcgctcatgaggttagagaaagaccactgcatctctgaa
ctcgtggatcgacacgaaaaggagaacaccctgctgcgccaagagttttcagcactcaag
cagaaatcgcaggatgcggagaaagactgcaaggaacgagtccagaagatccagcgcgat
caccaggaccagattgatgccttacagaaggaaaaggagaatgaaaagagggctttccag
gagaaagagcaagagctaaaaactgttattggagacctgcagacagaaaactcactacta
tctggaagactggagcaggagaaggtggaggccctgcagagggcagagaaggagaaagag
gaggcggtcaaagctgcattacaagaggccttaagagactttcaactccaaaaagaggag
acagagacaagactgttaggacaaattgagctacttgaaaatcaactcagagaaagacaa
tccactgacatagcgggacctactgtagaaaagacagagactggtatggaaaccagtgct
gcattgtcactggacagtggccagtggaccgaggaaagggcattgctcctgggccaacta
gagctcctggaacgaacaaagaacgaggagatgcagaacctgaagacctcgctcattgct
gagcagcagacaaacttcaatactgttctgacccgggagaaactaaagaaagaacaaatc
atcagtgatctcactgagaagctcaaaaacttagcacagcaacaagagaaagataaaggc
ctgatcgaaacgctctctgaggaccgtgcctccatccttcaggagaagaagcagatggag
gaggaactgaaccgtctgcgaagctccgtcctcgtctcttcgtccttctttcctcccaat
cccatcccggtcatcacagaagctcacggttcctgtggccctatccgtgtggaagtcctc
tcgcggtccacccctgatccagagagattggcgtccgtggctgtgctcaaggatgaggag
agggtggagtcagccgtggaggccagcatgatgaccgtgcatgacaaccctatgctgtct
gaagagaaacagcgcataatgattttggaaaggactttacatatgaaggaggaagagaac
aaaagacttagtcaaagactgatgtcccagagtatgtcgtccgtctcgtcacggcactcg
gagaaaatcgccattcgagattttcaggtgggcgacttggttctcataatcctggacgag
aggcacgataattacgttctcttcactgttggtcccaccctttatttcctgcattcagag
tccctcactgcactggacctcaaaccagcgacaggagctacaagacggccgtgggttctt
ggaaaagtcatggagaaggaatattgccaagccaaaaaggcccaaaaccggttcaaagtt
cctctcggcactaaattctacagagtaaaggccgtgccatggaacaagaaagtgtaa
DBGET
integrated database retrieval system
