KEGG   Carassius gibelio (silver crucian carp): 128013198
Entry
128013198         CDS       T08819                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03271  Virion - Rotavirus
cgib04145  Phagosome
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04514  Cell adhesion molecules
cgib04530  Tight junction
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
cgib05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    128013198
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128013198
   04514 Cell adhesion molecules
    128013198
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128013198
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128013198
   04530 Tight junction
    128013198
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128013198
   04810 Regulation of actin cytoskeleton
    128013198
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    128013198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128013198
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128013198
   04515 Cell adhesion molecules [BR:cgib04515]
    128013198
   04090 CD molecules [BR:cgib04090]
    128013198
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    128013198
Exosome [BR:cgib04147]
 Exosomal proteins
  Proteins found in most exosomes
   128013198
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin beta subunits
   128013198
CD molecules [BR:cgib04090]
 Proteins
  128013198
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 vWA_SIBA-E RBP_receptor
Other DBs
NCBI-GeneID: 128013198
NCBI-ProteinID: XP_052451941
LinkDB
Position
B24:complement(17725831..17765414)
AA seq 799 aa
MELKLLLISTLLGMVCCSSAQQEGNECIKANALSCGECIQVGAKCGWCTDTEFLKQGEPT
SARCDELESLRKRGCGQMENPHGSLKILKNKAVTNRKKGAEKLRPEDITQIQPQKLSLNL
RSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFRIG
FGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNSLVGKQQISG
NLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHL
ENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAITEEFQPVYKELKNLIPKSAVGTLSAN
SSNVINLIIDAYNSLSSEVILENSKLPEGVTIGYQSRCKNGVVNEGENGRKCSNISIGDE
VSFNINITAQGCPKQGKPESIKIKPLGFTEEVEIMLNFICECECHKHGIRNSEMCHNGNG
TFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNSTDICSNNGECVCGTCECKKRD
NPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYSGSACDCSQDTSTCLAS
NKQSCNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDTCE
KDCNYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNTEKEVHVVETLEC
PAGPDIIPIVAGVVTGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTDNPIY
KSPINKFKNPIYGRKAVAL
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggagctgaagctacttctcatatccacattattagggatggtatgttgcagcagcgca
cagcaagagggcaacgagtgcatcaaagccaatgctttatcctgtggcgagtgcatacaa
gtgggggctaaatgtggatggtgcactgatacagagtttctgaagcagggagagccgacg
tcagcgcgctgtgatgagctggagtcgctcaggaagagaggctgtggccagatggagaac
cctcacgggagcctaaagatcctcaagaacaaagcagtgaccaaccgcaagaaaggagca
gagaaactccgacccgaggacatcacacagatccagcctcagaaactcagcctcaacctc
agatctggggaacctcagaatatcaaactgaagttcaagagggctgaagactatcccata
gacctctactatctgatggacctgtcctactccatgaaggatgacctggagaacgtcaag
aacctagggacgagtctgatgaaggaaatgtccaagatcacctcagatttcagaataggt
tttggctcttttgtggagaagacagtgatgccgtacatcagcacgactccagccaagctc
ctgaacccctgcacaggggaccaaaactgcaccagtcccttcagctacaagaacgtgctg
aaactgaccagcaacggggagcagttcaacagtctggtgggaaaacagcagatatctggc
aacctggactctcctgagggggggtttgatgccatcatgcaggtggccgtctgcggagag
cacatcggctggagaaacgtcacccgtttgttggtgttctccacagacgcaggtttccat
tttgctggcgatggcaaactgggtggaatcgtgcttcccaatgatgggaaatgtcactta
gagaacaacatgtacaccatgagccattattacgattacccctccatcgcccacctggtt
cagaaactgagtgaaaacaacatccagaccatctttgccattacagaggagttccagccg
gtttacaaagaacttaaaaacctgatcccaaagtctgcagtcgggacgctttcagccaac
tccagcaatgttatcaatctcatcatcgatgcctacaattctctttcttccgaggtgatc
ctggagaacagtaagcttcctgaaggagtgaccatcggctatcagtcgcgctgtaagaac
ggagtggtgaacgagggagagaacggaaggaagtgctctaacatctccatcggagacgag
gtctcattcaacattaacatcacggctcaaggctgtcccaaacaaggcaaacctgagagc
attaagatcaagcccctgggcttcactgaggaggtggagatcatgctcaacttcatctgc
gagtgtgaatgtcacaaacacggcatcaggaacagtgagatgtgtcataacggcaacggg
acgtttgagtgtggagcctgcaggtgtaataagggacgtgtgggcaggcagtgtgaatgt
cgaaaagatgaggtgtccaccgaagacctggacaagaactgtcgcaaggacaatagcacg
gacatctgcagcaataacggcgagtgtgtgtgtggcacctgcgagtgcaagaagagagac
aatcctgaagagcgctacagcggcaaattctgcgagtgcgacaacttcaactgcgaccgc
tccaataataaactctgcggaggacacggccgctgtgagtgcagggtgtgtatctgtgat
gctaactactcggggagcgcgtgtgactgctctcaggacacctccacctgcttagcctcc
aacaagcagtcctgtaacggccgggggacctgtgagtgtgggacctgcaagtgcaccgac
cccaagttccagggtcccacctgtgagatctgccccacctgccccggggtctgcactgag
cacaaggagtgtgtgcagtgccgagcgtttggcacaggagagaagaaagacacttgtgag
aaagactgcaactactttaacctcatcaaggtgaaggacagagataagctccctcagccg
gtgcaggccttccccctcatgcactgcaaggagagagacgccaacgactgctggttctac
tacacctacgccgtcaacaacaccgagaaggaggtgcatgtggtggagactctagagtgc
ccggcgggtcctgacatcattcccatcgtagcgggcgtggtcacaggcatcgttctgatt
ggtctagctctgctgctgatctggaagctgctcatgatcattcacgaccgccgcgagttc
gccaagtttgagaaggagaagatgaacgccaagtgggacacgacagacaatccaatttac
aagagccctattaataaattcaagaacccaatctatggacgtaaagctgtggctctctaa

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