Carassius gibelio (silver crucian carp): 128013209
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Entry
128013209 CDS
T08819
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
128013209
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128013209
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
SpoU_sub_bind
LRR_8
AAA_16
P-loop_TraG
ATPase
Motif
Other DBs
NCBI-GeneID:
128013209
NCBI-ProteinID:
XP_052451976
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All DBs
Position
B24:complement(3219871..3230821)
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AA seq
1137 aa
AA seq
DB search
MDRHSHIPWQEYCYLDLKSNAQKQDTSKRMEDPGWLHRHQTLLQRFFSSSILVKVVHHMR
KADLLSAQEAGLIQEMGSLKDKVHLLVEFLSVTDPHGAALQAYLQSSHLTEYNIITVHES
MVRRYKDALIQRLKEDENSLAQVPGNSNSTLLLIECVSDLQQREHDLVQVSVNRGAGPLH
GRTLGLDKLIAPLTRGSTAPRVTLTIGVAGSGKSLMVRRFIQLWSTSQIYPELSLAIPIA
CWELSSFDRLSVERLLRLFIPYDNMDVILFNESCKVLLILDGLEEFRQSLDFADAPPTSD
PRREIPVSDLIANIVRGNLLPGTTLWLLSRPGTGAKVPAGLVDRVTEAPPLSRTQIKDYI
NHCITNTLDAYSISQDSSPSQTSTPVDVSSKVWTYLNTQKPLLILSSVPAVCHIIVTTLS
RLLKLDSDATPLPRTLTEVYAHYCWPHLSGSEAPSGGIRKPLGTLGRLAFYSLLRRRYTF
SETELRTYSVDVPTQGSMRGCRMLQRRQSWLSDSVAWQFTHTSVQEFLGALFYYISSRRG
MFDLFSESSVSWPRIGFHSHYRAALQKTNQSDAAAQGNLDLFMRFLSGLMSPAAGSLLGG
SLGVGHEEQVTQRTTASTLLQNAVSGTGGDAVSMRSVTMVTCLAELQQVEWLRSVEDDLI
NCSLRGKLKGGVCAVLAYLLQVSDACTEETQLSNCLDSSSLKRLLPQLLYCNKLRMENNE
FKEGTMELLGSLLSAKECHILMLSLADDSISSKGIKPLSRALLVNRTLTTLDLRGNNIGA
KGAKTLCEALKMNQVLVSVNLQNNHIEDEGARALAEVLQSNRKLTTLNVQKNSIGPEGVK
KIGEALKKNQTLQDLNISSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIKALSH
ALQSNRGLSCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRV
NRAITSLHLQWNFIKAGAAKALAQSLMSNTCIQLLDLQENALGDNGVIALAFALRSNSSL
IMLYLQGVSAGKSGAVALADALVVNESLHTLDLRGNSIGMEGAKAFSSALKKNRSLRSLN
LQENSLGMDGAIFIATALRGNHQLNYINLQGNGIGESGAKVVSDAIKAGAPDCVVDI
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatagacattcccatatcccatggcaggagtactgctacctggatctgaagtccaat
gctcagaaacaagacactagcaaaaggatggaagatcctgggtggttacacagacaccag
acattgttgcaacggttcttttccagctccattttggtaaaagtggtccatcacatgaga
aaggcagacctgcttagtgcacaggaggcggggcttatacaggaaatggggtcgttgaag
gataaagtgcatttattggttgagttcctgtctgtcactgatccacatggcgccgccctt
caggcttatcttcaaagttcacacctgaccgagtacaatattataactgtacatgaatct
atggttcgacggtataaagatgctctcattcagcgactcaaagaagatgaaaattcattg
gcgcaagtccccggcaactcaaattccacattactcctcatagagtgcgtatctgacctt
cagcagcgagaacacgaccttgtacaggtgtcagtcaacagaggggcggggcctcttcac
ggtcgaacactgggattggacaagttgatcgcacctttaacgagaggtagcaccgcccct
cgcgtgacattgacgattggtgtagctggcagcgggaagagcctaatggtccgccgtttc
atccaactatggagcaccagtcagatctatccagagctgagtctcgcaatccccattgca
tgctgggaattgagcagtttcgatcggctatcggtcgagcgcttgctacgactgttcatt
ccgtatgataacatggacgtaattttatttaacgaatcctgcaaagtgttgctcattttg
gatggattggaagaatttcgccagtcactggatttcgcagatgccccgcccactagcgac
cctcgacgcgaaattcccgtgtcggatctcattgcgaatattgtgcgaggtaacctgttg
ccagggacaacactctggcttttgtcaaggcctggcactggtgcgaaagttccagcagga
ttggtcgaccgtgtgacagaagccccgcctctttcccgaacccaaataaaggattatatt
aatcactgtattacgaacacgctagatgcgtattcgatatcacaagacagctcaccgtct
caaacaagcacacctgtggatgtttcctccaaagtgtggacttacctgaatacccagaaa
ccattgctcattttgtcttccgtgcccgcagtttgccacattatcgtaactacgctatcg
cgccttctaaagttggactcagatgccacgccccttcctcgaactttaacagaagtctac
gcccactactgttggccacacctctcaggatcagaagcacccagtggtggcatcagaaag
ccacttggcactctgggtcgccttgctttttatagcctcttacgacgacggtatacgttc
agtgagacagaattgcgaacttacagtgtcgatgtaccaactcagggcagcatgcgtggc
tgccgcatgctccagcgcaggcaaagctggttgtccgatagcgtggcgtggcagttcaca
cacacgtctgtgcaggagttcctcggggcactcttttactacatttcgtcaaggcgcggg
atgttcgatctgttttcggaaagcagcgtttcctggccccgcatcggcttccacagccac
taccgagctgcactgcagaaaacaaaccaatcagacgctgcggcgcaaggcaacctcgat
ctcttcatgcgcttcctgtcagggctgatgtctccggcagctggcagtttgttaggcggt
tcgctgggcgttgggcacgaagagcaggtgacccagcgcacaacagcatcaactttgctt
caaaacgcagtgtccgggacaggaggcgacgccgttagcatgcgcagcgtcacgatggta
acatgtctagcagagctgcagcaggtggagtggctacgatccgtagaggacgatctcatt
aattgcagcctgcggggaaagctaaagggcggagtttgtgctgttctcgcctacttgttg
caagtatcagacgcatgcactgaagagacgcaactgtccaactgtctagactcctcctcc
ttgaagaggctcctcccacagctgctctactgcaataagctgagaatggaaaacaatgaa
tttaaggaaggcaccatggagctgttgggaagtctgctgagtgccaaagagtgccatatt
ctgatgctcagtctggctgatgactccataagcagcaaaggcattaaaccgctcagtcga
gctctacttgtcaaccgaaccctcacaaccctggatcttcgtggcaataatattggtgcc
aagggagcaaaaacattgtgcgaggccctaaaaatgaaccaggtcctcgtctcagtcaat
ctgcagaataaccacatagaggatgaaggagcgcgtgcgctggcggaggttcttcaatcg
aaccgaaagctcaccacactcaatgttcagaagaacagcatcgggccggaaggagtgaaa
aaaatcggagaggcccttaagaagaatcaaactctacaagatctcaacatctccagcaat
catttgggtgatttgggaacagtagctctggctcaggctctcatggtcaaccatgtactc
cacacactcagtcttcagagtaactcggtgagtgacagaggcattaaagctctctcacac
gctcttcagtcaaaccgaggactcagctgtctcaatctaagggagaattcaataggagtc
gctggagccaaagacattgccaaggcgttaaaagtcaacacttgtcttagagaactcgat
ttgactgctaatcttcttcacgacgagggagtgacggccatcgctgaagccatgagggtc
aacagagccatcacctccttacatcttcagtggaacttcataaaggctggagctgctaaa
gctttagcgcagtctctcatgagcaacacctgcattcagctgctggatctgcaggagaac
gctctgggtgataacggggtcattgctctggcctttgctctgaggtctaactcttctctc
attatgctctatcttcagggtgtatcggcggggaaatcaggggccgttgctctagcggat
gctctggtggtcaatgaaagccttcatacactagatctgcgaggaaactccattgggatg
gaaggagcgaaggcgttttccagcgctctgaagaaaaacaggagcttgagaagtctgaat
ctacaggagaactctctggggatggatggagcgatcttcatcgctactgcgctaagagga
aaccatcagctcaactacatcaatctccagggtaacggcatcggggagtcaggggcaaag
gtcgtctcagacgccatcaaagctggcgcaccagattgtgtggtggatatctag
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