Carassius gibelio (silver crucian carp): 128013401
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Entry
128013401 CDS
T08819
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128013401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128013401
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128013401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
128013401
NCBI-ProteinID:
XP_052452322
LinkDB
All DBs
Position
B24:9990208..10010668
Genome browser
AA seq
1240 aa
AA seq
DB search
MIKAPSSDPQGSSHNNDPQSEPFTEEQLKNPSLRSGCMVHMQPALSKPCFEENQLNRLNS
QGQTVPVIADGQAKLYPSRAVRLFSTQTKCEDITPLRGPPVTPQAWSGLASFRVMGSFKK
LRTSVLQGIQNRSNAMAVGQERNPSSMFEDGGSFLVTKREVATNQIQETDKVSNGTAQTG
KMSSVLDEDDCEEDVNGFQRNSHFSKSIRRAYGAGRISLLDIVKTESPSNSEPDPSSTVE
SVGPCKNVENPGNVKGLKRLSKSADNLVFKSHFRRKAEPQNPECPSSIIFQRTDSSSLAD
LQENGSGQRQSPMRTRGHLQKLVGSLTDLSVKRKNTPGPISRKTLSPLSQIHDDYSRRTP
CVQMSGRQRRPSPTPSKAQQVNTHQHNPTIHPAPSCPAVFSSTLDDSLEPPSKTTALISD
YVQVAVSSTDFHSEAPQEKYCEPMECHQNGLNNHYSHMPKHCSSPSRKQTVNGVNVNLEC
LWTEERETDDLEASSDITKAFLKGDEISAAAASPVTCSTQSALVTPTTISPPFASDSSSS
VVARKRAGRSRPRPVSDYGQLASSKYCIPEEDRESESMDYTSQKDYNSNGSYKESNRPEN
GHVCAQTESRKRRPISVIGGMDLYSSPTAEQKDDTESLPSPVSRPPVPSHRVPPYRAVSA
RLRPCVFSQSTPIGLDRMGRRRGRRVLSDGSSDPMVDDSVSEEDGSFEELTEGTPYLQPE
VDLYTLNQYIQLGHAVHAEALWDHVTMEEQELAFKAGDVIRVLDVQEQDWWWGAVGDREA
WFPSSFVRVRVNQEDSSSDSVEIPPDAEESVPPDAHKQNSVHRQQMRANVVKEIMDTERV
YIKHLKDICEGYIRQCRKHPGMFTDAQLKTIFSNIEDIYRFQRKFLKDLEKKYNPQNPHL
SEIGSCFLQQEDGFSIYSEYCNTHPVACAELQRLMKQGRYKHFFEACRLLQQMIDISIAG
FLLTPVQKICKYPLQLGELLKYTPKDHSDHAGVCAAHQAMKNVASLINERKRRLESIDTI
AHWQVAILHWAGEDVLTRSSELIHSGELTRIVRPGKTQQRSYFLFDHQLVFCKKDVLRRD
LLHYRGRMDTDLLEPVDLPDGRHAELGVLKNAFLLRHAENLNVLCVLCCRKSQDKQRWLQ
AFARERRRVQEDQEMGMEITEAQRKQAVHNARKTKQGNMKKMNYSDHPVPPHHQPLHPLH
QRHVTVPTSIPQQQVFSLAEPKKKPSHLLYSLARSALFRK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcaccttcatcggacccacagggctcctctcacaacaatgacccacagagt
gaacctttcacagaggagcagctgaagaatccaagtttgaggtctggttgtatggtccat
atgcaaccagccctgtccaagccttgctttgaagagaaccagcttaacagactgaattct
cagggccagactgttcctgtgattgctgatggccaggccaagctgtatccctccagggct
gtacgtctgttttccacccagacaaaatgtgaggacattactccgctcaggggaccacct
gtcacaccacaggcatggtccggattggctagcttccgtgtcatgggttctttcaaaaaa
ctgcggacttctgtgctccaaggaatccagaaccggagcaatgcgatggcagtaggtcag
gagagaaatccgtcctcgatgtttgaggatggtggtagtttcttagtaaccaaacgagag
gttgcgactaatcaaatccaggaaacggacaaagtgtcaaatggaactgctcaaactgga
aagatgtcttcagttttggatgaagatgattgtgaggaagatgtgaatgggtttcagaga
aattcccatttctctaagagtatccgcagggcttatggggcaggacggatctcattgctt
gacatagtcaagacagagagcccgtctaacagtgagcctgaccccagcagcactgtggag
tccgttggaccttgcaagaacgttgagaatccaggaaatgtcaagggtctcaaaagacta
agcaagagtgcagataatttagtcttcaaaagtcattttagacgcaaagctgaaccacag
aacccagaatgccccagttctataatttttcagaggaccgacagttcttcactggctgac
ttgcaggaaaatggttcaggtcaacgtcaaagccccatgaggacgcgtggacatttgcaa
aagcttgtcggtagtttaaccgacctgtcggtcaagcgtaaaaacacaccaggccccatc
tccagaaaaaccctgtcacctctcagtcagatacatgatgactactcccgcagaacccca
tgtgtacaaatgagtgggcgccagcggaggccttcacccacacccagtaaagcccagcag
gtcaacactcaccaacacaacccaactatacaccccgcgccctcctgccccgctgtcttt
agttccactttagatgactctctggagcctcccagcaaaacaacagccctgataagtgac
tatgttcaggtggctgtgtcctcaacagatttccattcggaagccccacaggaaaaatac
tgtgaacctatggagtgccatcaaaatggattaaataaccactactctcacatgcccaag
cattgctcaagccccagtcgaaagcagacagtcaatggtgttaatgttaacttggagtgt
ttatggactgaagagagggagactgatgatcttgaggcttcatcagatatcacaaaagcg
tttctcaaaggtgacgagatctcagctgctgctgcttcacctgtcacctgttccacacaa
tccgccctggtaactccaacaacaatctctccaccctttgccagtgactcttcctcttct
gtggtagccaggaaaagggccggtcgctccagaccccggccagtgtctgactatggccag
ctggccagctcaaagtactgcatcccagaggaggacagggagtccgagagtatggactac
acttcccaaaaggactacaatagcaatggcagctacaaagagagcaacagaccagagaat
ggtcatgtgtgcgctcaaacagagagcagaaagagacgtcccatctctgttataggagga
atggatctgtattcatccccaactgcagagcagaaggatgacactgaaagcttgccttct
ccggtatcccgtcctccagtgccctctcatagagtgcctccataccgggccgtatctgcc
cgtctgagaccttgcgtcttctcccaaagcacacctatcggactggataggatggggcgg
cgcagaggacgcagagtgctcagcgatggcagttctgatccaatggttgatgatagtgtg
agtgaagaggatggcagctttgaagaactgactgaaggaacaccgtatctacaaccagaa
gtcgatctttacacactcaatcagtacatacagttgggacatgccgtgcatgcagaggct
ctgtgggaccatgtcacaatggaagagcaggagctggccttcaaagccggggatgtgatc
cgtgttctggatgttcaggagcaggactggtggtggggtgcggtgggcgaccgcgaggcc
tggtttccctccagctttgtgcgagttcgggtgaatcaggaggattcaagcagtgatagt
gtagaaatcccaccggatgcagaggaatccgtcccaccggatgctcacaaacaaaactca
gtgcacagacagcagatgagagccaatgtggtcaaagaaatcatggacacagagcgtgtt
tacatcaaacatctcaaagatatctgtgagggatatatccgtcagtgtaggaagcaccct
ggcatgtttactgatgcacagctaaagacaatcttcagcaacatcgaggacatctacagg
ttccagagaaagtttctgaaggacctagaaaagaaatacaacccccagaaccctcatctc
agtgagattggctcctgcttcctacagcaggaggacggtttctccatatactctgaatac
tgtaacacacatccagtggcatgtgctgaattacaacggttgatgaaacaaggcagatat
aaacacttcttcgaagcctgccgtctcttacagcagatgatcgacatctccattgctggc
tttctactcacacctgtacagaagatttgtaaataccctcttcagctgggagagcttttg
aagtacacacccaaagaccacagtgaccacgcaggggtgtgtgccgcacatcaagcaatg
aagaatgtggcaagtctgataaatgaaaggaaaagacgacttgagagcatcgacaccatc
gctcactggcaggtggccatcctccactgggcgggtgaagatgtgttaacacgaagctcc
gagctcattcactccggcgagttaacgcggatagtgcggcccggtaagacgcaacaacgc
agctacttcctgtttgaccaccagctggtgttctgtaagaaagacgtcctgcggagagac
ctgctacactaccgtggtcgcatggacactgacctacttgagccagtcgacctgcctgat
ggacggcacgctgagctgggcgtcctaaagaacgcgtttctcctgcgtcacgcagagaac
ctgaatgtgctgtgtgtgctgtgctgcagaaagagccaggacaagcagcgatggctgcaa
gcgtttgctcgagagcgcagacgcgtacaggaagaccaagagatggggatggagattacc
gaggcccagaggaagcaagcagttcacaacgccaggaaaactaaacaaggaaatatgaag
aaaatgaattattctgatcatcctgtgcctcctcaccatcagccgctacatcctctccat
cagcggcatgtgactgtgccaaccagcatcccccagcagcaagtcttctctttagcagag
ccaaagaagaagccctctcacctgttgtactcacttgcacgcagtgccctcttcaggaaa
tga
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