Carassius gibelio (silver crucian carp): 128013458
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Entry
128013458 CDS
T08819
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128013458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128013458
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128013458
04147 Exosome [BR:
cgib04147
]
128013458
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
128013458
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
128013458
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128013458
Exosomal proteins of other cancer cells
128013458
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
TPR_MLP1_2
DUF4515
FapA
Motif
Other DBs
NCBI-GeneID:
128013458
NCBI-ProteinID:
XP_052452422
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All DBs
Position
B24:complement(5221670..5228484)
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AA seq
452 aa
AA seq
DB search
MASRTNTSSYKRMFGAERPAIVRSTYSSRQYSSPVRASSRVSYSSASPSIYMSKGARVRS
SAPLPRLATETLDFGLADAINTEFKANRTNEKAEMQHLNDRFASYIEKVRFLEQQNKILT
AELEQMRGKGSSRVGDLYEDEMRELRRQVDQLTNEKGAVEVDRDNLGEDIERLKEKLQEE
MLQREDAENTLRGFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEELAELQMQIQEQ
HVQIDMEVAKPDLTAALKDVRQQYETLASRNLQESEDWYKSKFADLSEAAARNNEAIRLA
KQEANDYRRQLQSLTCDLEALKGTNESLDRQMREMEDNFSMEASGYQDTIVRLEDDIRNM
KDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIVTPFPNLSSLTLRESMKEIRP
AIDSLSKKVVIKTIETRDGHIINESTQNDDLE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgaacaaacacgtcttcttacaaaaggatgttcggtgcggagcgaccagcg
atagttcggtccacttactccagccggcagtacagcagcccggtgcgcgcaagctcgcgc
gtgtcctacagcagcgcgtctccatccatctacatgagcaagggcgcgagggtgcgcagc
agcgccccgctgccgagactcgccaccgagacgctggacttcgggctcgccgacgccatc
aacaccgagttcaaagccaaccgaaccaatgagaaagcggagatgcagcatctcaacgac
aggtttgccagttacatagagaaagtgagatttctggagcagcagaataagatcttgacc
gcggagttggagcagatgcggggcaaaggctcgtcccgggtcggtgatctgtacgaggat
gagatgagagaactgaggcgacaagtggaccagctcaccaacgagaagggagcagtggag
gtggaccgggacaatctgggagaggacatcgagcgcctcaaagagaaacttcaagaagag
atgctccagagagaggatgcggagaacacccttcggggcttcagacaggatgttgataac
gcctccctggctcgtctggatctggagagaaaagtggaatccttgcaagaagagatcgct
ttcttgaagaagcttcacgatgaggaacttgccgaactgcagatgcagatccaggaacag
catgtgcagattgatatggaggtggccaaacctgacctcaccgctgccctgaaagacgtc
cggcagcagtacgagaccctggcttccaggaacctccaggagtctgaggactggtacaaa
tcaaagtttgctgacctgtcagaagctgctgcccgaaacaacgaagcgatccgtctggcc
aagcaggaggccaatgactatcgccgccagcttcaatctctcacctgcgacttagaagct
cttaaaggaactaatgagtccctggatcgtcagatgagagagatggaggataacttctcc
atggaggcgtccggttaccaggacaccatcgttcgtctggaggacgacatccgcaacatg
aaggatgagatggcacgccatctacgtgaataccaggatctgctgaacgttaaaatggcc
ctggatattgagatcgccacctacaggaagctgctggaaggggaagaaagcaggatcgtc
acaccattccccaacctctcatcattaacccttcgagagtccatgaaggaaatcagacct
gcgattgacagcctgtcaaagaaagtggtgataaagaccatcgagaccagagatggacat
ataattaacgagtccacccaaaatgacgatctggaatga
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