KEGG   Carassius gibelio (silver crucian carp): 128013458
Entry
128013458         CDS       T08819                                 
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128013458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128013458
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgib04812]
    128013458
   04147 Exosome [BR:cgib04147]
    128013458
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     128013458
Cytoskeleton proteins [BR:cgib04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     128013458
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128013458
  Exosomal proteins of other cancer cells
   128013458
SSDB
Motif
Pfam: Filament Filament_head DUF1664 DUF7491 TPR_MLP1_2 DUF4515 FapA
Other DBs
NCBI-GeneID: 128013458
NCBI-ProteinID: XP_052452422
LinkDB
Position
B24:complement(5221670..5228484)
AA seq 452 aa
MASRTNTSSYKRMFGAERPAIVRSTYSSRQYSSPVRASSRVSYSSASPSIYMSKGARVRS
SAPLPRLATETLDFGLADAINTEFKANRTNEKAEMQHLNDRFASYIEKVRFLEQQNKILT
AELEQMRGKGSSRVGDLYEDEMRELRRQVDQLTNEKGAVEVDRDNLGEDIERLKEKLQEE
MLQREDAENTLRGFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEELAELQMQIQEQ
HVQIDMEVAKPDLTAALKDVRQQYETLASRNLQESEDWYKSKFADLSEAAARNNEAIRLA
KQEANDYRRQLQSLTCDLEALKGTNESLDRQMREMEDNFSMEASGYQDTIVRLEDDIRNM
KDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIVTPFPNLSSLTLRESMKEIRP
AIDSLSKKVVIKTIETRDGHIINESTQNDDLE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggccagccgaacaaacacgtcttcttacaaaaggatgttcggtgcggagcgaccagcg
atagttcggtccacttactccagccggcagtacagcagcccggtgcgcgcaagctcgcgc
gtgtcctacagcagcgcgtctccatccatctacatgagcaagggcgcgagggtgcgcagc
agcgccccgctgccgagactcgccaccgagacgctggacttcgggctcgccgacgccatc
aacaccgagttcaaagccaaccgaaccaatgagaaagcggagatgcagcatctcaacgac
aggtttgccagttacatagagaaagtgagatttctggagcagcagaataagatcttgacc
gcggagttggagcagatgcggggcaaaggctcgtcccgggtcggtgatctgtacgaggat
gagatgagagaactgaggcgacaagtggaccagctcaccaacgagaagggagcagtggag
gtggaccgggacaatctgggagaggacatcgagcgcctcaaagagaaacttcaagaagag
atgctccagagagaggatgcggagaacacccttcggggcttcagacaggatgttgataac
gcctccctggctcgtctggatctggagagaaaagtggaatccttgcaagaagagatcgct
ttcttgaagaagcttcacgatgaggaacttgccgaactgcagatgcagatccaggaacag
catgtgcagattgatatggaggtggccaaacctgacctcaccgctgccctgaaagacgtc
cggcagcagtacgagaccctggcttccaggaacctccaggagtctgaggactggtacaaa
tcaaagtttgctgacctgtcagaagctgctgcccgaaacaacgaagcgatccgtctggcc
aagcaggaggccaatgactatcgccgccagcttcaatctctcacctgcgacttagaagct
cttaaaggaactaatgagtccctggatcgtcagatgagagagatggaggataacttctcc
atggaggcgtccggttaccaggacaccatcgttcgtctggaggacgacatccgcaacatg
aaggatgagatggcacgccatctacgtgaataccaggatctgctgaacgttaaaatggcc
ctggatattgagatcgccacctacaggaagctgctggaaggggaagaaagcaggatcgtc
acaccattccccaacctctcatcattaacccttcgagagtccatgaaggaaatcagacct
gcgattgacagcctgtcaaagaaagtggtgataaagaccatcgagaccagagatggacat
ataattaacgagtccacccaaaatgacgatctggaatga

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