Carassius gibelio (silver crucian carp): 128013660
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Entry
128013660 CDS
T08819
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128013660
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128013660
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128013660
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128013660
mRNA cycle factors
Stress granule specific factors
128013660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
128013660
NCBI-ProteinID:
XP_052452747
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All DBs
Position
B24:complement(13925831..14043287)
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AA seq
678 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVAPAVAKPSPGALGLQPTINGTVPATTPTCPSPAPGFVDST
VPASPSGPPQEYMANPKEKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGN
QIWESEGSSIKKAQHCAATEALTESVLPRPPPRSPKADSNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYGANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR
HSAAMKALQALKNEPIPERPPQCLEENNETEENSDASKSEISLVYEIALKRNLAVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSLLQELKKLPVLPVVEKPKVHY
KKRPKTILKTEPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVDT
EVTTGTGPNKKVAKRNAAEAMLLHLGYKASTPLQNTPEKMDNKSWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVPGAPGNYLTPKDIGQGSTGPFYTPSVGNTATIARELLL
SGTSPTAEALSLKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTENEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIKVENGSCDIQAKRLAERMDSK
PTNSGTTAQDSKDSKAVV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacatcagcccccttgtctggacctggcctgaccgctgtt
gcgcccgctgtggccaagcccagtccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcccctggctttgtggactccact
gtaccagccagcccatcaggccctcctcaagaatacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacaggattcaacctcaatacaagctg
ctgaatgagaaagggccagcacatgctaagatcttcacggtgcagctgtgcttggggaac
cagatatgggagtcagaaggcagcagcatcaaaaaggcccagcactgtgcagctaccgag
gccctgacggagagcgttctcccccggcctcctcctcgctcacctaaagccgacagcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagctatctacagacccctggaccccaaacccattcccaactatggagccaattac
aacttcagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggaacaacgagtttatcggagaggggcggactcgccaagctgccaga
cacagtgcggccatgaaggcccttcaggccctgaagaacgaacccattccagagagacca
cctcagtgtttagaggagaacaacgaaacggaggagaacagcgatgccagcaaatctgag
atcagcctggtctacgagatcgcgcttaaaaggaacctggctgttaactttgaggtgctg
aaggaaagtggacccccgcacatgaagagtttcctcacacgtgtgacggttggggagttc
tcagccgagggagaggggaatagtaagaaactctctaaaaagagagcggccctctccttg
ctgcaggaactgaagaaacttccagtgcttccggttgtggagaaacccaaagtgcattac
aagaagcggcctaaaaccatattaaagacagaaccagagtatggacagggcatgaaccct
ataagcagactggctcagattcaacaggccaaaaaggagaaggagcccgaatatatgcta
ctttcagagagagggatgcctcgccggagagaattcattatgcaggtgaaagtagatact
gaggtgaccacaggaactggacccaataagaaagtggccaagcgtaatgcagctgaggcc
atgctgcttcacctgggctacaaggcatctacaccattacagaacactccggaaaagatg
gacaacaaaagctggaatggacaaagggctgcttttcccgaaacaacgaccaacacacaa
aaaggaattcttcacctctccccggacgtgtatcaagaaatggaagcgagtcggaataag
ggagtccccggtgcccctggaaactacctgacacccaaagacattggacaagggtccaca
gggccattctacaccccgtcggtgggcaacactgcaaccattgcaagagagctgctgctg
agtgggacttcgcccaccgctgaggccctgagcctgaagggaaaagcacctgctttggcc
tgtggctccatccagccttcccagcagctggagtacttagcccacattcaaggcttccag
gtgcagtactcagatcggcaaactgagaacgagttcatgacctacctgaccctctcacct
gtgcagatgaccttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggaccctgtggatggaccaatcaag
gtagaaaatggatcatgtgacatacaagcgaaacgtctagccgagcggatggacagcaaa
ccgactaactcaggcaccactgctcaggacagcaaggattcaaaggccgtcgtctag
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