KEGG   Carassius gibelio (silver crucian carp): 128013744
Entry
128013744         CDS       T08819                                 
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
  KO
K09447  interferon regulatory factor 7
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04620  Toll-like receptor signaling pathway
cgib04621  NOD-like receptor signaling pathway
cgib04622  RIG-I-like receptor signaling pathway
cgib04623  Cytosolic DNA-sensing pathway
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128013744
   04621 NOD-like receptor signaling pathway
    128013744
   04622 RIG-I-like receptor signaling pathway
    128013744
   04623 Cytosolic DNA-sensing pathway
    128013744
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128013744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgib03000]
    128013744
Transcription factors [BR:cgib03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    128013744
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 128013744
NCBI-ProteinID: XP_052452897
LinkDB
Position
B25:complement(19151909..19157557)
AA seq 421 aa
MAAIQGSAIAKPQFGPWLIEQVESGKYEGLCMIGNDTFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKIKEHPNDKAKWKTNFRCALSSLKNFEMLEDHSKDPVDQHKVYRIIRPQNHQEV
QSVEPDQLPFIPHLYSMSDEMEQELLSQVETMDLNHHHAETQPWETSSQQIIPTTSSNYF
ETPYSDVQPFQNNTPVPDPQLYTTVQQSNLPGLWDLEISINYRRTEVLKTRLCSPLINFH
YQCNPSELRGVPICFPSTEGLIDQRQIQLTNRILDSIQRGLQLEVNQCGIFGLRQDQCNV
FVSTSDPSEIQNPQPRKLHQNTRELLLSFEKYLKDLKDFTENKRGSPDYTIYLCFGEKLP
DGRPLEKKLITVKVVPLICRVFHEKAQMDGASSLHSENISLQISHNSLYDLINSLGLPSV
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcagcgatacagggaagtgcaatcgccaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgtgcatgataggcaatgacacatttcggatc
ccctggaaacacaactcacgaagagacctcggggacgacgatgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaaagagcaccctaacgacaaagcgaaatggaagaca
aatttccgctgtgcgctttctagtctaaaaaattttgagatgttagaggatcactccaaa
gatccggtcgaccaacacaaggtctatcgcatcatccgtcctcaaaatcaccaagaggtt
cagagtgtagagccagatcaacttccattcattcctcatctctacagtatgtctgatgaa
atggagcaagaattgctcagccaggtggagacaatggatctaaatcatcatcacgcagaa
acccaaccatgggaaacctcttcccaacaaatcattccgaccacctcgagcaactacttt
gagactccctactcagatgttcagccctttcagaataacacacctgtcccagacccacaa
ctctacactacagtgcagcaaagtaaccttccaggtctctgggacctggagatctcgatc
aactacagaagaacagaagttttgaaaactcgcctgtgttcgccactcattaatttccac
taccagtgcaacccatctgagctgagaggagtgccaatctgcttcccatccactgagggt
ctgatcgatcaaagacagatccagttaactaaccgcatcctggacagcattcagagaggc
ctgcagctggaggtaaaccagtgtggcatcttcggcttgcgtcaggaccagtgtaatgtc
tttgtcagcaccagtgacccgtctgagatccagaacccacagcccagaaaactgcatcag
aacaccagagagcttctactcagctttgagaagtacttaaaagatctgaaagattttaca
gagaacaaacggggatctccagattacaccatctacctatgcttcggagagaagcttcca
gatggaagacccctggagaagaaacttattactgtcaaagttgtgcctctgatctgccgt
gtatttcatgagaaagctcaaatggatggagcatcctctcttcacagtgaaaacattagc
ttgcagatctcccacaacagcctttatgaccttataaattctttgggtttgccttcagtg
gcctaa

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