Carassius gibelio (silver crucian carp): 128013896
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Entry
128013896 CDS
T08819
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128013896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128013896
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128013896
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128013896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
Zn_ribbon_6
CaATP_NAI
U-box
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
128013896
NCBI-ProteinID:
XP_052453046
LinkDB
All DBs
Position
B25:7883428..7890190
Genome browser
AA seq
1063 aa
AA seq
DB search
MEKGRWSSEDAPRASMPDELSHPKFSEWKFKLFRVKSMEKAPLPNETPVEKENQPEVAIE
VAGSPGSVMKLCFGGKSKENMESARGRVDLKLQEIDTHMNLLRCLCRLCGLSIRKTKGPS
HEVQGDLEVSSRCALRRMGCKFLTWPEVILKVFKVDVTTDMETVHPSLFCHRCWTAAMRG
GGFCSFTRTQIPDWKPHTSNCDLCFPKKSSFQRIGRKRAKPLKSAHSLPKRIKRDSSEFS
GANRVWRQTTDNTVGSGGKEWLKLSVQRGQWVKNITQCQKDHLSTKLIPTEVPADFIHAV
TCQVCDHLLSDPVQSPCRHLFCRVCILRYSRTLGPNCPTCNQHLNPSHLTRPAKFFLATL
NSLPLLCPREGCSDWVRLDSFREHCLNHYHEKESQEEQTPSDQNIDGYLPVNKGGRPRQH
LLSLTRRAQKHRLRDLKNQVKVFAEKEEGGDVKSVCLTLFLLALRAGNEHKQADELEAMM
QGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFH
QFEWQPALKSVSSSWDVGIIDGLSGWTTSVDDVPADTISRRFRYDVALVSALKDLEEDIM
EGLRERELDDSICTSGFTVVVKESCDGMGDVSEKHGGGPAVPEKAVRFSFTIMSISIRAE
GEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLILSVG
GLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDE
NLERYEIWRKNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEI
GEVYQKSNPSREERRRWRSALDKQLRKKLKLKPVMRMNGNYARRLMTREAVEVVCELVPS
EERREALQKLMDLYLQMKPVWRSTCPSRDCPVQLCQYSYNSQQFADLLSTTFKYRYDGKI
TNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDVLKHHW
LYTSKYLQKFMEAHKNSAKAMQATINPEETPDEVDMPLEVPDF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggaggtggagttctgaagatgcccccagagcctccatgcctgatgaactg
tctcatcctaagttttcggaatggaaatttaagctatttcgggtcaagtcaatggagaag
gcccctctgcctaacgaaacaccggtggagaaggaaaaccagcctgaggtagcaattgag
gtggcaggctctccaggcagtgttatgaagctctgttttggagggaagagtaaggaaaac
atggagagtgctcgagggagagtggaccttaagctgcaggaaattgacacacatatgaat
cttctcagatgcctgtgtcggctttgtggtctttcaatacggaagactaaaggtccgtca
catgaagtccagggagacttggaagtgtccagtcggtgtgccttgcgtaggatgggctgc
aagtttctgacctggccggaagtgatcttgaaggtcttcaaggtggatgtgacaaccgac
atggagacggtgcatccatctttgttttgtcacagatgctggactgctgccatgagggga
ggaggtttctgttctttcactaggacccagatcccagactggaagccccacacctccaac
tgcgacctctgcttccccaagaagagctcttttcagcgaataggaaggaagcgggctaaa
ccacttaaaagtgcacacagccttccaaagagaatcaaaagggactcctcagaattctca
ggggccaatagagtgtggagacagaccacagataatactgtgggatctggtgggaaagaa
tggttaaaactatcagttcagagaggacagtgggtaaagaatatcacacagtgccagaag
gaccatctgagcactaagctcatccccaccgaagtcccagcagacttcatacatgctgtt
acttgccaagtatgtgatcatctgctttctgaccctgtccagtcaccatgtagacacctg
ttctgtcgggtctgcatcctgagatacagtcgtactttgggcccaaactgtcccacttgt
aaccaacatctaaatccatcccacctgaccaggccagccaaattcttccttgccaccctc
aactctctccctctgctctgccccagagaaggatgcagtgactgggtccgtttagactcc
tttagagaacactgccttaaccactaccatgaaaaagagtctcaagaagaacaaacacct
tcagaccagaacatcgatggttacttgccggtcaacaaaggtgggcgtcctcgacagcac
cttttgtcactgacccgtcgggctcaaaagcacaggctgagagacttgaagaaccaggtg
aaggtttttgctgaaaaggaagaaggaggggatgtgaagtcggtctgtttgacgctcttc
cttctggcgttgagagctgggaatgaacacaaacaagcagatgaactggaagctatgatg
caaggcaggggatttgggctgcatcctgcagtgtgtttggctataagggtaaacaccttc
ctcagctgcagtcagtaccacaagatgtaccgcactgtaaaggccactagtggtcgccag
atattccagcccctccacactctacgtaatgctgagaaagagcttctccctgggttccac
cagtttgagtggcagccagctttaaaaagtgtttccagctcctgggatgtgggcatcatt
gatggtctctctggttggacaacctctgttgacgatgtccctgcggacacgatctccaga
agattccgttacgatgtggcactggtttctgcattaaaagatttggaggaggacataatg
gaaggactgagagagagggagctggatgacagcatatgcacctctggttttaccgttgtg
gtgaaagaatcatgtgacggtatgggagatgtcagcgagaagcatggaggtggtccagcg
gttcctgagaaggcggtgaggttttccttcacaatcatgtccatctccatcagagctgag
ggtgaagatgatggcatcaccatctttcaggaacaaaagccaaactctgagctctcctgc
agacctttgtgtctcatgtttgtggatgagtccgaccatgagaccctgacggccatcttg
ggacctgtggtagcagagcggaaagccatgatggaaagtcggcttattttatcagttggt
ggtctgctacgatcctttaggttcttcttccgaggcacaggctacgatgagaagatggtt
cgtgaaatggaaggcctagaagcatcaggctccacttatatatgcacactctgcgactca
acccgagctgaagcgtctcagaacatggtgctacattccatcacacgtagccacgatgaa
aatcttgagcgctatgagatctggaggaaaaatcctttctcagagtctgctgatgagctt
cgtgaccgggtcaaaggtgtttctgccaagccattcatggagacccagcctactctagat
gccctgcattgtgacattggcaatgctactgaattctacaagatctttcaggatgagatt
ggcgaagtctaccagaagagcaatccgagtcgagaggaacgccgccgttggcggtcagcc
ctggacaaacagctgagaaagaagctgaaactcaaacctgtgatgaggatgaatggaaac
tatgctcgtcggctgatgacacgtgaagctgtggaggtggtctgtgagctggttccttct
gaggaacggcgtgaggcactacaaaaactgatggacctctacctccagatgaagcctgtg
tggcgttccacctgtccctcccgagactgccctgtccaactctgtcaatatagctacaac
tctcagcaatttgctgatctgctttccaccacatttaagtaccgctatgatggaaaaatc
accaactacctccacaagactctggcccatgttcctgagattgttgagagagatgggtct
attggagcgtgggccagtgaaggcaatgagtctgggaacaagctgttcaggcgttttcgg
aagatgaatgcaaggcagtccaaaacgtttgaacttgaagatgtacttaaacaccactgg
ctgtacacctccaaatatcttcagaagtttatggaggctcacaagaattcagcaaaagca
atgcaggccacaatcaacccagaagagaccccagatgaagttgatatgcctcttgaagtc
ccagatttttga
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integrated database retrieval system
