Carassius gibelio (silver crucian carp): 128014017 Help Entry 128014017         CDS       T08819                                  Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism cgib  Carassius gibelio (silver crucian carp) Brite KEGG Orthology (KO) [BR:cgib00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cgib03400]     128014017 DNA repair and recombination proteins [BR:cgib03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      128014017 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  128014017 NCBI-ProteinID:  XP_052453216 LinkDB All DBs Position B25:complement(3732717..3773654) Genome browser AA seq 2402 aa AA seqDB search MLGTRSSECGALEVRLLAERVACGALEDAASLELSRGPSVLCCCVNTAGEVKLSSISESR AALHTLQHSCTDVVWERSGADVKLKLLLLDSGCALWLYELDAQGQPLLLCERSSDSLLQC VQHKHPDVLELLSLRPLWFADGCCVLLLNTCVLLQLRWTDETEQLETVSCVRLASPLQTE DVCADCRLCRGTLFMLLRTGLTYVFDSTDGKLLASLDFVSYCSVADVSFCLLQVSQDLST AVSVTRQNQALAVDLNHYFRKYPDHLHCRSAPNRPLLRPTESWDQDSLASSVHSLSVLDK PFQTDRSWEARLSSLYGRSKAPERRGHQGSPWYRDFPHVECRRAEATAKLSQPSVKPGGA VTCFDVPDGATAAGLNVSEYSALVTFVCPGNTNTVLAYWDLEGESVTYHRADAPAAPVQR SAEEHLCLLLKPSGLSVVLFCVTQDELLNRLMIFGTAGTVDSLCHLNAWGRCSIPIHALQ AGLKNHQLDTVDFFLKSKENIFSPASGFVLPDQTPAVSTQSHLRNVQALCPALDLLRSAI HDTHTEAQSQQFCDQLLSITLTFLNTQTKVLLTSSHELDVNLLECVQILDGYISDLRRYM KKFPWPDVCVSPDAPVSTADTDQEWQALSDEEVVHQAILSRRIPHAQAFLRRRGCVEYSL EDIRRTGLRRTFTCLTLRDLQQAKTLLTHMGFNVKEQLHSICVFTADRDLRAFMVEELQK QSFLSSEELQQVEFIHTINNLCSTPATRCSSRLDTSRVVQMSRSDPESRRLLQEITQEPD SSSCSSLLDPVRLDWVRYWDRDTQSSILLSRLQPSAQGSWDASVLWSYLTSLHDGVRASA WVHSSTAADAPCWPALTPHIINHHSRCGRYLRDQILDLLARQGLFVQSELEDFQQLLWRL GQAGGVMHHGKDPPVPQEQEFHQRFVLHCLENSLQYLLYCYLEHYRLTPGNCPLLTDRNL LESFPWFEMMLKLQKITRDLTEPERVFGASLTAAQVLLPGSQASISSMLLEGHSLLALST IMFRPGGIDQAVREGERGQDPLSRVDPQLLRMALGAYPKLRTALFPQSGPRCDVSLYHLL QALHPLDPSRLFGWQSANATGGSEASSELPHFSSSQLVSKFAVVENLDFLYYLSHGRPAF AFGVFLTQQLIDCSNVKLQVSLAADQAYSLGLLNFSSACVSAACVCFCELLGVCSLKLRV DLCVLNLILRLWTQTCTEEEHRDVSSLRQTLVEKAGKLVSGEKPSAQELLVHLETAVRDA LEKKGICRSSFEAAQEWALPVQFCHLHALPLSPAFPQDCARDGQWLNFLLFVQLHNYPLQ QVRSLAAGFSPALQSHISLAFQDLLPTGSHQALEDPGSVARALPRDESPEPPRELFQVLL ESQEKPSPWRFLLSEAVRQRSPALSVLAACHQAAELLQCLCVWILASVGDDVTQEATAHI QESPAHHVWNLHDLSVLWKTLLCRSKIRPLIRGFQLFQRESPLISMLHMYEFCSDYKDYQ RAKDKLLDFQKCLLNLRSSSVVLSSDVLPVQWVESQASVLLLTLLKQSRTQYELRRLLQL LVDMERLLKSNGPDFRKLSQLSQVLSDTPVPLSACLLEQYSSAGLQDECRTIMQQLQDLG LFTQARSVAQLAELPLDCLIINELLRDLCAHQQKRQWERQETRLAFWRRCHEQLETDRVQ PEAASQFFLSQAEEPLESASELDHLQERCLLLGLAGHWLSLCDPPLPVSRLAALEKRQWQ SRIRWLLLHTALERQSLFAPSALSHDSFQSLLREFSFSRMAALDDPLHLSVSELPAAEDE CVLSGDERQALAALVAQLLDEGGVSEASRVCRYFGLFHRDVWLVLKCRGLASGELQPELH SPDGETRRSLPSSPSMSSLSSFVVVPSPDDQVLVQLKHLVDQCCSGKSYCKQVLSLYELS KELQCSFAEISSEEPEAVLRKVLLSQQVDRYKRAQAFISVQGLQPDTVARLVSTAVLEGL LASSQEGETGERLMYGPADGRETFLQLAKLCGDPNLVGTNLMDSIPTVPLSELSCTVEIL ILAHDCFSLTCNMEGIVRVLQASRHLSHSHLAHGDGYGLLVRLLTGIGRYNEMTYIFDLL HQNHRFEMLLRKKVESNVRLKTALLDYIKRCLPGDSEKHNMVALCFSMRREIGENHEAAA RTQLKIIESQPWAITADLKNALMKVLTLLKDAAESYSKDSCVRQAVKCVKLAKLVTLQLH FVSQGQEQRVINLRLPDLQSTIVSLPRCYQVFVLANQHQCDRNVLDCDWLQVFVLANQHQ CDSNVLDCDWLQVFVLAEAYDYSPDWAELLYQKVILRGDFSYLEEFKRHRAISAGLFEDI SKKMSHHKAPASSSQNLKKLLSHCEDVYTHYKLAYEHKFLDVANMLLQDSKTNSFLKDRL GT NT seq 7209 nt NT seq  +upstreamnt  +downstreamnt atgctggggacgcggagcagcgagtgcggcgcgctggaggtgcgtctgctggcggagcgc gtcgcgtgcggggcgttggaggacgccgcgtcgctggagctcagcagaggcccgtcagtg ctgtgctgctgtgtgaatacagctggagaagtgaagctgagcagcatctctgagagtaga gcagctctccacactctccagcactcctgcactgatgttgtgtgggagcgcagcggtgct gatgtgaagctgaagctgctgctgctggactctggctgtgctctgtggctgtatgagctg gatgctcagggtcagccgctgcttctgtgtgagagatcgtctgattcactgctgcagtgt gttcagcacaaacaccccgacgtgctggagctgctgtctctgaggccgctgtggttcgct gatggctgctgtgtgctgctgctgaacacatgtgtgctgctgcagctccgctggacggac gagacggagcagctggagaccgtgtcctgcgttcggctcgcttcaccccttcagacggag gacgtctgcgccgactgccggctctgtcgggggacgctcttcatgctgctcaggactgga ctcacatatgtgtttgacagcactgatgggaagctcttggcgtcgctggacttcgtctcg tactgcagtgtagcagacgtctccttctgtctcctgcaggtctctcaggatctcagtaca gctgtgagtgtgacccggcagaaccaggccctcgccgtcgacctcaaccactacttcagg aagtatccagatcaccttcattgtcgttcagccccgaatcggcctcttctcagacccact gaatcatgggatcaggacagtctcgcgagctccgtccacagtctgtcggtcctcgataaa cctttccaaacagacaggtcgtgggaggcgcgtctgtcttctctgtatggtcgatctaaa gctccggagcgcaggggtcatcaggggtcaccctggtacagagatttccctcatgtggag tgccgtcgagcggaggccaccgccaaactctcgcagccctccgtgaagccagggggcgct gtgacgtgtttcgacgtgccggacggagcgaccgcagcaggcctgaacgtctcggagtac tctgcgctcgtgacgttcgtctgtcccggaaacacaaacacggttctggcgtactgggat ctggagggtgaaagtgtgacgtaccaccgcgcagacgccccagccgcccctgtccagaga tcagccgaggagcacctgtgtctgctactgaagccctcgggtctgtccgtggtgttgttc tgcgtgacgcaggatgagctgttgaaccggctgatgatttttggcacggctgggacggtg gactcgctctgccatctgaacgcctggggacgctgctcaatacccatacatgccctacag gccggcctgaagaaccaccagctggatacggttgatttctttctgaagagtaaggagaac atcttcagccccgcgtctgggtttgttctgcccgatcagacgccggccgtctcgacccag agccatctgaggaatgtgcaggctctgtgtccggctctggatctgctgcgatctgctata catgacacacacactgaagctcagagccaacagttctgtgatcagctgctgagcatcacg ctcaccttcctcaacacacaaaccaaagtgctcctcaccagctcacacgagctggacgtg aacctgctggagtgtgtgcagattttagacggctacatctcggacctgcggcgatacatg aagaagttcccctggccggatgtgtgtgtgagtccggacgctccggtgtccaccgccgac acagaccaggagtggcaggcgctgtctgatgaggaagttgttcatcaggctatcttgagc agacgcatcccacacgcacaggctttcctgcgcagacgcggctgtgttgaatacagtctg gaggacatcaggaggacgggactgagacgcaccttcacctgtctcactctcagagacctg cagcaggccaaaacactgctgactcacatgggcttcaatgtgaaggagcagctccacagc atctgtgttttcacagccgatcgggatctaagggccttcatggtggaggagctgcagaag cagagtttcctctcgtctgaagagctgcagcaggtggagtttattcacaccattaataac ttgtgctccacacctgccacgagatgctccagccgtctggacaccagcagggttgttcag atgagccggtctgatccggagagcaggcgtctgctgcaggagatcacacaggagccggac tcgtcctcctgcagctctctactggatcctgtgcgtctggactgggtcagatactgggac agagacacgcagagctccatccttctgtcccgactgcagccgtccgctcagggttcgtgg gatgcctctgttctctggtcgtatctcacctctcttcacgatggtgtccgagcctcggcg tgggttcacagctcgaccgcggctgacgccccctgctggcctgcgctcacaccacacatc atcaaccaccacagccgctgcggacgctacctgcgggatcagatcctggacctgctcgcc cgtcagggcctgtttgtgcagtccgagttggaggacttccagcagttgctctggcgactg ggtcaggccggaggagtgatgcatcatgggaaggatcctcctgtgccacaggagcaggag tttcaccagcgcttcgtcctgcactgtctggagaacagcctgcagtacctgctctactgt tacctggagcactacaggttaactcccgggaactgcccgctcctgaccgacaggaacctg ttggagagtttcccctggtttgagatgatgctgaaattacagaaaatcaccagagacctg acagagccggagcgggtgttcggggccagtctgacagcggcgcaggttctgctccccggg agtcaagccagcatcagcagcatgttactggagggtcacagtctgctcgccctctccacc atcatgttcagaccgggcggcatcgaccaggccgtgcgcgagggcgagcgtggtcaggac ccgctgagcagagtcgacccccagctgctgagaatggccctcggtgcatatcccaaactc agaacggccctgttccctcagagcggcccgcgctgcgatgtgtccctctaccacctcctg caggctttgcatcctctggatccctccagactgttcggatggcagtcggccaacgccacg ggcggcagcgaagcgtccagcgagctgccgcacttctccagctctcagctcgtcagtaag ttcgccgtcgttgagaatctggacttcctgtattacctgagtcacggacggccggcgttc gctttcggggttttcctcacgcagcagctgatcgactgcagcaacgtgaagcttcaggtg tctctggctgcggatcaggcgtactcgctgggcctgttgaacttcagcagcgcgtgtgtg tcggcggcgtgtgtgtgtttctgcgagctgctgggtgtgtgtagcctgaagctgagggtg gatctctgtgtgctgaacctcatcctcagactctggactcagacgtgcacagaggaggag cacagagacgtctcttcactgcggcagacgctcgtggaaaaggccgggaagctggtcagc ggtgagaagccaagcgctcaggagctgctggttcatctggagacggccgtcagagacgct ctggagaagaaaggcatctgtcgatcgtcgttcgaggcggcgcaggagtgggcacttcct gtccagttctgtcatctgcacgctcttcctctaagccccgccttcccacaggactgtgct cgtgacggacagtggctcaacttcctgttgtttgtacagctgcacaattatccgctacaa caggtcagatctctggcagctggtttcagtccggctctgcagtcgcacatctctctggct ttccaagatcttctcccgaccggctcccatcaggctctggaggatccagggagcgtcgct cgtgctctcccccgagacgagagccccgaaccccccagagagctgttccaggtgctgctg gagagccaggagaagcccagtccctggaggttcctgctgtctgaagccgtccgtcagcgc agtcctgctctgtccgtgctggcggcctgccatcaggccgccgagctgctgcagtgtctc tgcgtgtggatcctggcgtctgtcggcgatgatgtcactcaggaagccaccgcccacatc caggagagccccgcccatcacgtgtggaacctccacgatctctccgtcctgtggaagacg ctgctgtgcaggagcaagatcaggcctctgattcgtggattccagctgttccagagggag tctccgctgatctccatgctgcacatgtacgagttctgctccgactacaaagactatcag cgagccaaagacaaactgctggacttccagaagtgtttgctcaatttgcgcagcagcagt gtggtgttgagctcagatgtgctgccggttcagtgggtggagtctcaggcttcggttctg ctgctgacgctcctgaagcagagcaggactcagtacgagctgcgccggctgcttcagctg ctcgtggacatggagcgcctgctcaaatccaacggtcctgacttcaggaagctcagtcag ctgagtcaggtgctgtcagacactcctgtgcctctgtctgcgtgtctgctggagcagtac tccagcgcaggtctgcaggacgagtgcaggaccatcatgcagcagctgcaggacctcggc ctcttcacacaggccaggagcgtcgcacagctggccgagctgcccctcgactgcctgatc attaatgagctgctgcgagatctgtgcgctcaccagcagaagagacagtgggagagacag gagacacggctggccttctggagaagatgtcacgagcagctggagacggaccgcgtccag cccgaagctgcctctcagttcttcctgtctcaggctgaggagccgctggagtccgcttcg gagctggatcatctgcaggagcgctgtctgctgctgggtctggcgggtcactggctgtct ctgtgtgatcctccgctccccgtctctcgtctggccgcgctggagaagcgtcagtggcag agtcgaatccgctggctgctgctgcacacggctctggagcgccagagtctgttcgctccc tcggctctgtcccacgactccttccagagcctcctcagggagttctccttctccaggatg gctgcgctggacgacccgcttcacctgagtgtgtccgagctcccggcggccgaggacgag tgtgtgctgtccggggacgagcgccaggctctggccgctctggtggcgcagctgctggac gaggggggcgtgagcgaggccagccgcgtctgcaggtatttcgggttgtttcacagagac gtgtggctggtcctgaagtgtcgtggtctggcgagcggagagctgcagcctgagcttcac agccctgatggagaaaccagacgcagtctgccatcatctcccagcatgagcagcttgtcg tcgttcgtggtggtgccatcgccagatgatcaggttctggttcagctcaaacatctggtg gatcagtgctgcagcggcaagagttactgcaaacaagtgctgagcctctacgagctctcc aaggagctgcagtgctcgttcgctgagatctcgtcggaggagcccgaggcggttctgagg aaggttcttctgtcgcagcaggtggaccgttataagcgtgctcaggccttcatcagtgtc cagggtcttcagccggacaccgtcgcccgtctcgtctccaccgccgtgctggagggtctg ctcgcctcgtctcaggagggagaaaccggagagcggctgatgtacggcccagccgacggg agagagacgttcctccagctggccaaactgtgtggagacccaaacctggtcggcaccaat ctgatggacagtatcccgaccgtcccgctgtcagagctcagctgcactgtggagatcttg atcctggctcacgactgcttcagtctcacctgtaacatggagggaatcgtgagggtcctg caggcgtccagacacctgagtcactcgcacctggctcacggagacggctacgggctcctg gtgcgtctcctcacaggtatcggcaggtacaatgagatgacgtacatctttgatctgctc catcagaaccatcgcttcgaaatgctgctgaggaagaaggtggagtcgaacgtcaggctg aagacggctctgttggactacatcaagcgttgtctgccgggtgacagcgagaagcacaac atggtggctctgtgtttcagcatgcgtcgagagatcggagaaaaccacgaggcagcggct cgaacgcagctcaagatcatcgaatcacagccctgggcgatcactgcagatctgaagaac gctcttatgaaggtcctgactttactgaaagacgcagctgagagctactcgaaggactcg tgtgtgcgtcaagctgtgaaatgtgtcaaactggccaaactggtgactctccagctgcac ttcgtgtctcagggacaggagcagcgcgtcatcaacctgcgtctgccagacctccagagc accatcgtgtctttaccgcgctgttaccaggtgtttgtgttggccaatcagcatcagtgt gaccgtaacgtgctggactgtgattggttgcaggtgtttgtgttggccaatcagcatcag tgtgacagtaacgtgttggactgtgattggttgcaggtgtttgtgttggctgaagcgtac gactacagtccggactgggccgagctgctctatcagaaggtcatcctcagaggagacttc agctatctggaggagttcaagcggcaccgagcgatcagcgctggcctgttcgaagacatc tccaagaaaatgtctcatcacaaggctccggcgagctccagtcagaatctgaagaagctt ctgtctcactgcgaggacgtttacactcattataaactggcttacgagcacaagttcctg gacgtggccaacatgctgctgcaggactccaagaccaacagcttcctgaaggaccggctg ggcacctga

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