Carassius gibelio (silver crucian carp): 128014169
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Entry
128014169 CDS
T08819
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128014169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128014169
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128014169
Cul7 complex
Target recognizing subunit
128014169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
F-box-like
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_SCAP
F-box
WDR55
WD40
EIF3I
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
128014169
NCBI-ProteinID:
XP_052453485
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Position
A5:35404769..35439885
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AA seq
628 aa
AA seq
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MEENELSTFRERWKQELKKNTKTSCKDKEGYFGHPSKDSSSLHQSASFWEKQSNAAQQSQ
QTPKDQPQYLSIAEGLLDGRSSPLLDRIEQERTRRRRAPDSEALNTDAPHKKVNKCQKLL
EQFLQDLNEMNDIPFFDVELPYELALKIFYFLGRTDLGRCAQVSKSWKVLAEDEVLWHRL
CLEEGYHNGASISDSPCWKSTLRDCRNTESMVKSNWKNRVGSIRHLQFELGKVLCDVSSC
AGLVIAGYTSGDVCLWDTLHWDKSYLRPTHFIRNETPAPYVSHVRVNKTVATAAYENGCV
DVWSTETGLEPIHQYQHLQRVHALDLSPDSPVLVSASGPDVRVDSPDEQSYWRSPCLIQL
PKPVDGVFVVPGRRDFPLVTAWAGESVYLLDSRRNEEQEPRVLHSVYGHPVTCVEVSPGR
AALGIKGSGWAMSDGGNKIQVYSLETSQCELTVGNSAGNFTCVDLRDSHPHLLVCGNKDR
RVRVFDLRTGSSVISLYAHHMGVTTIQADDWKIVSGGGEGLVCVWEMRIRAKLWEMHNRH
PVRHIQFNSSSLVTANVPNEKNPRGACITDDDLTAHRRYRGLICHYDFSMDSSTPDHVLP
ICRSNYTESSGYNYNIGLAMPYDVLKIT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaacgagctttcgaccttccgagagcgatggaaacaggagttaaagaaaaat
accaagacatcatgtaaagacaaagagggatattttggccatcccagcaaagacagctca
tctcttcaccagagcgcgagcttttgggagaaacagagcaatgcggcgcagcaaagtcag
caaacaccaaaagaccagccgcagtatttgtcgatcgccgagggtttgttggacggcaga
agcagtccactgctggacagaatcgagcaggagcgaacgcgcaggaggcgcgctcccgat
agcgaggcgctcaacacggatgcaccccacaaaaaagtcaacaagtgccagaaactgctc
gagcagttccttcaggacctgaatgagatgaatgacatcccattctttgatgtggagttg
ccttatgaactggcgctcaagattttctacttcctgggcagaacagatctaggacgttgt
gcccaggtgtctaaatcctggaaggtgctggctgaggatgaggtcctgtggcatagattg
tgcctggaggaaggttatcacaatggggcaagtatctctgactccccctgctggaagagc
actcttcgagactgccgcaacactgagagcatggtgaagtcaaactggaagaatcgtgtt
gggtccattcgtcatctgcagtttgagttaggaaaggtgttgtgtgacgtcagttcctgt
gctggtcttgtgattgctggctacacctctggggatgtctgcctgtgggacactcttcac
tgggacaaatcttacctgcgccctacacatttcatcagaaatgaaacccctgcaccttat
gttagtcacgtacgcgtcaataagaccgtagccacagccgcttatgagaatggctgtgta
gatgtgtggagcactgaaaccggtcttgagcccatccatcagtaccagcacctccagagg
gttcatgctttggatctaagtcccgatagtccggttttggtctctgcatcaggaccggat
gtgcgagtggactccccagatgagcagagctactggagatcaccgtgtctcattcagtta
ccaaagcctgtagatggggtgtttgtggtgccagggaggcgggacttccctttggtcaca
gcgtgggcaggtgagagtgtttacctgctggattccagaaggaatgaagaacaggaacca
agagttcttcactctgtatacggccatccagtgacttgtgtagaagtgtcacccggcaga
gctgcactggggatcaagggcagcggatgggccatgagcgacgggggaaacaagattcag
gtgtacagcctggagaccagccagtgcgagctgaccgtggggaactcggcgggaaacttc
acctgcgtcgacctgagagacagccaccctcacctgctggtgtgtgggaacaaagacagg
cgcgtgagagtgtttgacttgcgtacgggctcctcagtcatctctttatatgcccatcac
atgggcgtgaccaccatccaggcagatgattggaagatcgtaagtggcggtggcgaggga
ttggtctgtgtgtgggaaatgaggataagagccaaactctgggaaatgcacaacagacac
ccggttcgccacatacagttcaacagcagctccctggtgacggccaacgtccccaatgag
aagaaccctcgcggggcttgtatcacagacgatgacctcaccgctcaccgcaggtacaga
ggactgatctgtcactatgatttctcaatggactcgtctaccccggatcatgtcctgccc
atctgcaggtccaactacactgagtcctctggatacaactataacattggcttggcgatg
ccgtatgatgtactgaaaatcacctag
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