Carassius gibelio (silver crucian carp): 128014188
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Entry
128014188 CDS
T08819
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128014188
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128014188
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
Alanine_zipper
F5_F8_type_C
DUF7652
BNR_6
Motif
Other DBs
NCBI-GeneID:
128014188
NCBI-ProteinID:
XP_052453506
LinkDB
All DBs
Position
B25:16748378..16780729
Genome browser
AA seq
1785 aa
AA seq
DB search
MLLQLAALLVLGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRGTYDESIHQVTSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCESSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPVFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRMEIKEKYYYSVYDMVVRGNCFCYGHASECAPVDGAGEVVEGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYQASGNVSGGVCD
DCRHNTMGHKCEQCKPFFYQHPEKDIRDPNICESCNCDPVGSLNGGVCDPLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGASPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPKPQDRSPTWTGVGFVNVPEGAYLEFSIDNI
PYSMEYDVIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLSLYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
MVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSAFLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDRCAPATFLFGPQGCRPCDCSPEGSVHSFCHEATGQCECIP
RAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPLTGQCLSCRDHTSGHHCERCLNGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSLDSNQVFCVCNQGYKGARCEECAPGYYG
NPYEVGGECRPCQCNNNIDMTDPESCDARTGACLKCLYHTEGEGCDRCKLGYYGNALTQS
CRKCVCNHMGTAEEMCPSPGNCNCDLSSGQCQCLPNVVGQHCDQCAPDTWNMASGKGCED
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGMAEQQ
CNKVTGHCVCVEGVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKANGITGPYQATINSVESSANSIRNILAQNPATQPLTEIQGLLEQATALMAEMNTK
LNLTEETLSEISSDNNSTDTKLKSLKEEAQKLEQTVKDLQGQVEFVKNSDIRGARASVSR
YYEQSQMAEIRANASTIDPDNLVNQSATLRTETEDLMNQTKEEFIQRQEEFAKKLDNLAG
QLETLDLTELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCDGLTTLAHNAWQ
KAKDFDLEINSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKKRVDGSNEELRQ
LIKQIRDFLTQDGADLESIEAVASEVLQMQMPTTPAQLQNLTAEIRERVSSLTEVEDILN
QSAADILRAESLLEQARKARKEASDVKDTAEMVKEALQQAERAQSSVTEALKQASADIKG
TQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANSTEKEAESISAL
AEQLKKDLDSDLKDKYRSVEEQITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagcccttttagttttaggggcatgggctctggcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcccgccacaggagatcttctcatt
ggaagagcacaccaactctcggccacctccacatgtggactccagaaacctgagcctttt
tgtatagtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccaggggaacc
tacgatgaaagcatacaccaagtaaccagccacagaatcgaaaatgtcgtgactacgttc
gcccctaaccgcctcaagacttggtggcagtcagaaaatggcctggagaacgtcacaatc
cagttgaacctggaggcagagttccacttcacccaccttatcatgacctttaaaacgttc
agacctgctgctatggtgatcgaacggtcgtcagacttcgggaagacttggcaagtgtac
cgttacttcgcctatgactgcgagtcctccttccccttcgtctctcaaggacccatgacc
aaagtggacgacgttatctgcgattcccgctactctgacattgaaccctcgactgagggt
gaggccatctttagggtcttggatccagtcttcaggattgatgatccctacagccccaga
attcaaaacatgttaaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggggacaatcttctggactcacgtatggagatcaaggagaagtactactactcagtctac
gacatggtggtcagaggaaactgtttttgctatggtcacgcgtctgagtgcgcccccgtc
gatggagcgggagaggtcgtggagggcatggtccatggccattgtatgtgtaatcataac
accatggggctgaactgtgagcgctgtcaggacttttaccatgacctgccctggagaccc
gcggagggacgcaacaccaacgcctgtaaaaagtgtaactgcaaccatcactctgattcc
tgtcatttcgacatggccgtgtatcaggcgtcgggtaacgtgagcggcggcgtgtgcgac
gactgcagacacaacaccatgggtcacaagtgtgagcagtgcaagcccttcttctaccag
catccggagaaagacatccgcgaccccaacatctgcgagtcctgtaactgtgatccggtc
ggctctctcaacggtggggtgtgtgatccgctgacagacgtgtctctcggactgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggtgagcgctgtgaccagtgcaaacagggc
cattacggactcagcgatgaccctctgggatgccagccatgcacgtgcaatgctttgggg
acggttccaggtgcaagtccatgcgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaacaacaactgctctcca
gaaacgggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttacgaagcagaggacgccaagttt
ggacctggtgtgacggttgtcccgagacccaaacctcaggacagatcccctacttggact
ggcgttggttttgtgaacgttcctgaaggtgcctatcttgagtttagcatcgacaacatc
ccctactccatggagtatgacgttatcatccgatatgaacctcagctgccagagcagtgg
gaggaagtgttgatgactgtcatcaggcctcgcgtcattaccgccgacagccgctgtgca
aacacaatgcctgacgatgacaaccaggtggtgtctctgcatcccggatccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgcttgagtctg
tctctctactcggctctcagcgatgtgcagtcaccgtacactctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctggttcagagggtggagac
atggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gccgtggtgaaaacccccatgactgatatctgcaggaattacatcttcagcgtgtccgct
tttctgcaccagggagttaaagcctgtcagtgtgacccgcaggggtctctcagcacggtc
tgtgacccgagcggtggccagtgccagtgtcgccccaacgtggttggcaggaactgcgac
agatgcgccccagccaccttccttttcgggccgcaaggctgcaggccatgtgactgcagt
cctgaggggtctgtccactccttctgccacgaggccaccggtcagtgcgagtgtattccc
agagcgtacgggcggcagtgtgaccgctgtctgccgggacactggggattccctaactgt
cggccctgcacatgcaatggccacgctgagcagtgcgacccgctcacgggacagtgtctg
tcctgccgggaccacacctctggacaccactgcgagaggtgtttgaatggctattatggt
gaccccgtcctgggctctggagaccactgccgcccctgcatgtgtccggacggtcccggc
agcggaagacagttctccggcgcgtgttataagagcctcgactccaaccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccgtacgaggtgggtggagaatgccggccctgtcagtgcaacaacaacatcgacatg
acggacccggagtcctgtgacgcccggacgggcgcttgtctcaaatgcctgtaccacacc
gagggcgagggctgcgaccgctgcaagctcggttattacggcaatgcactgacccagagc
tgcagaaagtgtgtgtgtaatcacatgggcactgctgaggagatgtgcccctctccgggg
aactgtaactgtgacttgagcagcggtcagtgtcagtgtcttcccaatgtggtgggccag
cactgcgaccagtgcgcgccggacacctggaacatggccagcgggaaaggctgcgaggac
tgcgactgcgacctcaaccactccttcagctcgtcctgcaatgagattatgggccagtgc
tcttgtaaacctgggtttggcggcagaacctgccgagagtgtagagagctgttctgggga
aaccctgaggtcaagtgtcacgcatgtgattgtgacccaagaggcatggcggagcagcag
tgcaacaaggtcacaggtcactgtgtttgcgtggaaggtgtttccggacctcgatgtgac
acgtgcgctcgaggctacacgggcgagttcccacactgcgagcgctgccaccagtgcttc
gccgaatgggatgtcattgtgggcgacctcaccaaccagacccacagactggtccagaag
gtcaataccatcaaagccaacggcattacaggaccctaccaggccaccatcaatagcgtc
gaaagcagcgccaactcgatccgcaacatcctggcccagaatccagccactcagcctcta
acggagatccagggacttctcgaacaagctactgccttgatggctgaaatgaacaccaaa
ctcaacctgacagaggagaccttgtccgagatctcatccgacaacaacagcacggacacc
aaactgaagtccctcaaagaagaagctcagaaactggaacagacggtgaaggaccttcag
gggcaggtggagtttgtgaagaattcagacatccgaggggccagagccagcgtgagtcga
tactatgagcagtcccagatggcagagatccgtgccaatgcctccaccattgacccagac
aacctggtcaatcagtctgccaccctgcggacagaaacagaggacttgatgaaccagacc
aaagaagagttcattcaaagacaggaggagtttgcgaagaaactggacaacctcgctgga
cagctggagactctggacctcactgagcttagcgagaagacatgtggcagtccagctggc
tcggagaactgtgccgactctccctgcggaggcctgagctgtgtggatggggaaggaaac
aggaagtgtggaggagagggatgtgatggcctcaccacgctggcccacaatgcctggcag
aaagccaaggactttgacctggagattaacagcgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaggtaaaagcagatgaagcaaagcttaatgctcaagaagtg
ctggcaaaaaccaatgagaccaaaaagcgcgtggatggaagcaacgaggagctacgccaa
ctcatcaaacagatccgagacttcctcactcaagatggagcggacctggaaagcatcgag
gctgtggccagtgaagttctgcagatgcagatgcccaccacaccagcccagctgcagaac
ctgaccgcagagatcagggagcgcgtgagcagcttgacagaagtcgaggacatcctcaac
cagagcgccgctgacatactgagagcagaaagcctcctggaacaagcacgcaaggccagg
aaggaggcgtcagatgtgaaagacaccgctgagatggtgaaggaggccttgcagcaggcc
gagcgcgcccagagttcggtaacagaggcactgaaacaggccagtgctgacatcaagggg
acgcaagacttgctggtctcggtggagtctgagacgtccgactcggagctaaaactgagt
aatgccacccgaaggctcttgaagttggaaagcgatgtagctctgctgaaagaaaaggct
ctcaacacctccaccagtgctaacagcacagagaaagaggctgagagcatcagcgcactg
gctgagcaactcaaaaaggatctggattcagacctgaaggacaagtacagaagtgttgag
gagcagatcacgcagaaggctgaaggagtggccgaggccaagaaaagagcagagaaactc
caacaggaggccaaaaatctgctactacaggccagcgacaaacttcagctcctcaaaaat
cttgagaagagctatgatgaaaaccagaagctgctggaggacaaggccaatgagctggtg
gatctggagaaggctgtgaaagagctgcttcaggagatcagtcacaaagtcaccgtctac
agcacctgtctgttttaa
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integrated database retrieval system