Carassius gibelio (silver crucian carp): 128014289
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Entry
128014289 CDS
T08819
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128014289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128014289
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
NGL family
128014289
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
128014289
NCBI-ProteinID:
XP_052453695
LinkDB
All DBs
Position
B25:complement(8184052..8347396)
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AA seq
647 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDEGHPTVQQKSGPT
PSSGIWETLPPSFTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPARTIEIINMDEDCVTGGPTMEGHLTLPPL
EHEHLNHYNAYKTVYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcatccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgtttgtgctgtcactggccctgcagcttctggtggtggct
ggcctggtgcgagcacagacctgcccctctgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tacttgaaccttcaggagaacctcatccaggtgatcaaggttgacagcttcaagcatcta
aggcacctggagatcctgcagcttagcaagaaccacatccgcaacattgaaatcggagct
ttcaatgggctggctaacctcaacactctggagctcttcgataatcgtctaaccacaatc
cctaatggggctttcgagtacctgtccaaacttaaagagctttggttgaggaataaccct
atcgagagcataccctcttatgccttcaaccgtgtaccatcactgcgaaggctggacttg
ggcgagcttaaaaggctctcgtatatctcagaaggtgccttcgaaggcctcagcaaccta
cggtacctgaacctgggcatgtgcaacttaaaggagatccccaacctcattcctcttgtc
cgattggatgagttggagatgtcaggaaaccagctgtctataataaggccaggatccttc
aaaggcctcgtccacttacagaaactgtggatgatgcatgcgcagatccagacgattgag
agaaatgccttcgatgatcttcagtccctcgtagagctcaatttggcccacaataacctt
accctcctgcctcatgacctcttcaccccactacaccacttggagagggtacacttgcat
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtgccggccaataccagttgctgtgcccgctgctcgtcacccgccagccacaaagggcgc
tacattggtgaacttgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcagacctgaacgtgactgagggcatggcagcagaactgaaatgtcgagcaaattct
ttgacctcagtcagctggataacacccaacgggtccatcatgacacacggggcatataag
gtgcgcatttctgtgctcaacgatgggacactaaactttaccaatgtcacaatgcaagac
acaggaacatacacttgtatggtgagcaactccgcaggcaacacgacagcctcagctacg
ctcaatgtgtcctcgacagagaacagcagcttcagttacttcactacagttacggtcgag
accacagaagcggcacatgatgagggccacccaacggtacaacagaagagtggccctact
ccttcttctgggatttgggagaccttaccaccttcctttaccaccacgaccacaacagca
cggacaccactgtccaccaaggccaccgacaagacctacaccatcccagtcacagccctg
attgatggctccctcaacaccttggatgaggtcatgaagaccacaaagatcatcattggt
tgctttgtggccatcaccctgatggcggccgtcatgctgatcatattttataaaatgcgc
aagcagcatcaccagcagaaccaccacgcaccggcgcgaaccattgagatcatcaacatg
gatgaggattgtgtaacgggtggacctaccatggagggccacctcaccctgcccccactg
gagcatgagcacctgaatcattacaacgcctacaagactgtgtacaaccatgcctccacc
atcaattctatacacagctctgcccacgaacctttgctaattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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