Carassius gibelio (silver crucian carp): 128014355
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Entry
128014355 CDS
T08819
Name
(RefSeq) autocrine motility factor receptor a isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04137
Mitophagy - animal
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128014355
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128014355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128014355
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128014355
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128014355
Multi subunit type E3
ERAD complex
128014355
LMBR1L-GP78-UBAC2 complex
128014355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
Rad1
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
128014355
NCBI-ProteinID:
XP_052453877
LinkDB
All DBs
Position
B25:21235349..21245646
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AA seq
613 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTVLSTLLLAGSILSAYSSVRDSQDPHSPPEEELELDRPGSVLS
HVLLILITDSLFVWVMVNTACCVLMLIAKGIQCIVFGPLRVSEKQHLKDKFWNFVFYKFI
FIFGVLNVQRVEEVVLWCLWFSVLIFLHLMVQLCKDRFEYLSFSPTTPVVSHVRVLALLG
SVLACCGGLAVLCALVGHLHGMHTVAFMAAECLLVTVRSGHVIIRYSIHLWDLNHEGTWE
NKSSYIYYTDFSMELTLLCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVLDNMESRFAVATPDELLANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNINEGVRERDEGQRAPLDDNMTAGAGTEARPHLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILSIAQANNSQLNAMAHQIQEMFPQVPYHLILQDLQLTRSVEVTTD
NILEGRIQVPFPTQRTPIQINTSPEDSAGASSSSEVAAPEVEDFEVRGSRFSKSADERQR
MLMQRKEELLQRARRRYLHRKSDEEDLFSTPATDTDDVMPSMEDEDSDSVTLRRRRLAAA
AERRMQRQEPPPF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctttttctggagcgcttcccctggcccagcttacagacatacaccgtcctg
agcacacttctgctggccgggagcatactgagtgcctacagctcagtcagagactcccag
gacccccacagcccccctgaggaggagctggagctggaccgccccgggagcgtgctctct
catgtgctgctgatcctcatcacagacagcctcttcgtctgggtgatggtgaacacggcg
tgctgcgtcctcatgttaatcgctaaagggatccagtgcatcgtgtttgggccgctgaga
gtcagcgagaagcagcacctgaaggataagttctggaacttcgtcttctacaagttcatc
ttcatcttcggcgtgctgaacgtgcagcgggtggaggaggtggtgctgtggtgtctgtgg
ttctccgtgctcatcttcctgcatctgatggtgcagctgtgcaaagaccgcttcgaatac
ctctcgttctctcccaccactccagtggtcagtcacgtgcgagtgttggctctgctgggg
tctgttttggcgtgctgcgggggtctggcagtgctctgcgctctggtcgggcatcttcac
ggcatgcacactgtcgccttcatggcagctgagtgtttgctggtgacggtgcgctcggga
cacgtcatcatacggtactccattcacctgtgggacctgaaccatgaggggacctgggag
aacaagagctcgtacatctactacacagacttcagcatggagttaaccctcctgtgcctg
gacctgatgcatcacatccacatgctgctcttcgggaacatctggttgtccatggctagt
cttgtgatctttatgcagctgcgctatctcttccacgaggtgcagagacggattcgccgc
cataaaaactacttgcgtgttcttgacaatatggagtccaggtttgctgtagcgacgccg
gacgagctgctggctaataacgatgactgtgccatctgctgggattcaatgactacagca
cgcaagctgccctgtggacatctgttccataattcctgtctgcgctcgtggctggagcag
gacacttcctgtcccacgtgccgtatgtcactgaacatcaatgaaggcgtgagagagaga
gacgagggtcagagggcaccgctggatgataacatgaccgccggagcgggaacagaggcc
cggccgcacctcaaccagcacaaccacttcttccacttcgacgggtcacgcattgccagt
tggctgccgagcttctctgtggaggtcatgcacaccaccaacatcctaagtatcgcacag
gccaacaactcgcagctcaatgccatggcccatcagatccaggaaatgtttcctcaggtc
ccttaccatctgatcctgcaggatttacagctcactcgctccgttgaggtcaccactgac
aacatcctggagggcaggatccaggtgcctttcccaacacagcgcacacccatacagata
aacacttctcctgaagactcagcgggtgccagcagcagttcagaggtcgctgcccccgag
gtggaagactttgaggtgcgggggagccgcttctccaagtccgcagatgagagacagagg
atgctaatgcagaggaaggaggagctgctccaaagagctcgcagacgttatctacacaga
aagtctgatgaagaagatttgttttccacccctgccactgatactgatgatgtcatgccc
tccatggaggatgaagactcagattctgtgaccttgaggcgcagacgactggcggctgca
gccgagagacgcatgcagaggcaggagcctcccccattctga
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