KEGG   Carassius gibelio (silver crucian carp): 128014457
Entry
128014457         CDS       T08819                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128014457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128014457
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     128014457
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_ACSF4 eIF2A Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR41 Tricorn_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_HPS5 NBCH_WD40 Cytochrom_D1 PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 WD40_like WDR54 VPS8_N Nucleoporin_N WD_LRWD1 Beta-prop_pof12 DUF2415 Beta-prop_IFT122_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 128014457
NCBI-ProteinID: XP_052454004
LinkDB
Position
B25:complement(6319745..6324018)
AA seq 305 aa
MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWWDEKLELQWTL
EGHQLGVVSVDISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSRY
IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
SPDNTHFVSSSSDKSVKVWDTTSRSCVNTFFDHQDQVWSVKYNPTGSRIVSAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacagtacagtatactattcaagcaggagcatgctcatgaagatgccatctgg
acggcagcatggggtcgcagcgagaaggacgggtcagaaaccattgtgaccggctctttg
gacgacctggtgaaagtgtggaaatggtgggatgagaagctggagctgcagtggacgctg
gagggtcaccagctgggcgtggtgtcggtggacatcagtcagaacggagccatcgccgcc
tccagctctctagatgctcacattcggctctgggatctggagacgggcaaacagatcaag
tccatggatgcaggccctgttgacgcctggacggtcgccttttctcccgactccagatac
attgccaccggcagccatctggggaaggtcaacatcttcggtgtagaaagtgggaagaag
gagcactcgctggacaccagaggaaaattcattctgagtatcgcctatagtccagatgga
aagtacttagccagcggtgctatagatggaatcattaatatctttgatattgcgactggg
aaactcctgcatacgctggaagggcatgcaatgcctatcaggtctctgactttctctcca
gactctcagctgctggtaactgcatcagacgatggatacatcaagatttatgacgtgcag
cacgctaacctggccggcactctcagtggtcacgcatcctgggtgctaaatgtggccttc
tcacctgacaacacacactttgtgtccagttcgtctgataagagtgtaaaagtgtgggac
acgaccagcagatcgtgcgtgaacacattctttgatcatcaagaccaggtttggagtgtg
aagtacaaccccacaggctcgagaatcgtgtctgcgggtgatgacagagccatccacatt
tacgactgtcccatgtga

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