Carassius gibelio (silver crucian carp): 128014729
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Entry
128014729 CDS
T08819
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03020
RNA polymerase
cgib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128014729
09124 Replication and repair
03420 Nucleotide excision repair
128014729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
128014729
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128014729
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128014729
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128014729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
128014729
NCBI-ProteinID:
XP_052454409
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All DBs
Position
B25:complement(10278875..10281889)
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AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPIPQEWPKSEYSEIEEDGVEAPYDPNGKPERFYYNVESCGSLR
PETIVMSAFAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgccaaccagcccacagtgaaaatcacggagctgacggacgagaatgtgaag
tttgtgatcgagaacacggatctcgctgtggcaaactcaattcgacgtgtattcatgtca
gaagtcccaaccattgctattgattgggttcaaattgatgccaactcctctgtgctccat
gatgagtttattgcacacagagtggggctaattccactcacaagtgatgacattgttgac
aagatgcagtactcacgagactgcacatgtgatgatttctgtccggagtgttcggttgag
ctcacgctggatgtgagatgcacagaagaccagacgcgacacgtgacctcacgggacctc
ctgtccaataacccccgagtcatacccgtaacatccagaagccgagacaacgatcccaat
gactatgtggagcaggatgacatcctgttggtgaagctgcggaagggtcaggagctgcgt
ctcagagcatacgctaaaaagggtttcggcaaggagcatgccaaatggaatcccactgca
ggggtgtcgtttgagtacgacccagacaatgcgctgagacacacggtgtacccaattcca
caggaatggcctaaaagtgaatattcagaaatcgaagaggatggagttgaagctccatat
gatcctaatggcaagccagaaagattctattacaacgtggagtcctgcggttcacttcgg
ccagagaccatcgtcatgtcggcttttgctgtacttaagaagaaactgagtgatctgcag
acacagctcagccatgaaattcaaagcgatgtgctcaccattaactga
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