Carassius gibelio (silver crucian carp): 128014734
Help
Entry
128014734 CDS
T08819
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128014734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128014734
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128014734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128014734
NCBI-ProteinID:
XP_052454415
LinkDB
All DBs
Position
B25:complement(4115939..4137603)
Genome browser
AA seq
616 aa
AA seq
DB search
MKEEKEMMDPSNGLNRPLEIVPNTEVKMKDRGQWSNKLEFVLSVAGEIIGLGNVWRFPYL
CYKNGGGAFFIPYLIFLFTCGIPVFFLEISLGQFTSEGGITCWRKISPLFEGIGYATQVI
VALLNFYYIIVLAWGIFYLSFSFTWNLPWASCNNTWNTDACVEFQRRNVSNDQTYLDNAT
SPVIEFWERRVLRISSGIEEIGTLHWDLVFCLLLAWVLCYFCIWKGVKSTGKVVYFTATF
PYLMLLILLIRGVTLPGASRGIQFYLYPDLGRLADPQVWMDAGTQIFFSYAICLGCLTAL
GSYNKYNNNCYRDSLALCFLNSGTSFVAGFAIFSILGFMSYEQNVPISEVAESGPGLAFI
AYPRAVSMMPISPLWACFFFIMIVLLGLDSQFVCVESLVTAMVDMYPAFFRQKNRRELLI
LAVAVVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETVCIAWIYGANRFYDNI
EDMIGYRPGPYIKYCWLFFTPATCFGTFAFSLIKYTPLKYNNEYVYPWWGYALGWLLALS
SMVCIPLWVVSKLSMAKGSLRERIHELITPSPDLPKTRREQEKLQAIFAADGDTLRQRGG
PTKDGYFPVSEKESHC
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagaaggagatgatggacccgtctaacgggctgaaccggccgctggagatt
gtcccaaacacggaggtgaagatgaaggacagaggacagtggagcaacaagctggagttt
gtcctgtcggtggccggagagatcatcggactgggaaacgtgtggcgcttcccgtatctc
tgctacaagaacggtggaggtgcatttttcatcccctacctgatcttcctcttcacctgc
ggtattcccgtgtttttcctggagatctctctgggtcagttcaccagcgagggaggaatc
acatgctggaggaagatcagcccgctgtttgaaggcattggttacgccactcaggtcatc
gtggctctgctcaacttctactatataatagttctggcctggggaatattttacctgtcc
ttctccttcacctggaacctgccgtgggcctcctgcaacaacacctggaacacagatgct
tgtgtggaattccaaagacgaaatgtatccaatgaccaaacttaccttgataacgcaaca
tcacccgtcattgagttttgggaacgcagagttctgcggatctcgtctgggattgaggag
ataggaacgctgcactgggatctggtcttctgtctgttgttggcctgggttctctgctat
ttctgcatctggaaaggcgtcaaatccaccggcaaggtggtgtacttcactgcgaccttc
ccgtatttgatgctgttgattttactgatcagaggggtcacactgcccggagcatcccgt
gggatccagttctatctttatcccgacctgggacggttagctgacccgcaggtgtggatg
gacgcaggcacgcagatcttcttctcatatgctatatgtttaggttgccttactgcactc
ggaagctacaataaatacaacaacaactgctacagggattctttggctttgtgtttcctg
aacagcggaaccagttttgtcgctggttttgccatcttctcgattctcggcttcatgtct
tatgaacagaacgtcccaatttcagaagtggccgagtctggtcctggtttggcgttcatt
gcatatccgcgggcagtgtccatgatgcccatctctccgctgtgggcctgtttctttttc
atcatgattgtacttctggggttggacagtcagttcgtgtgtgtggagagtctggtcacg
gctatggtggacatgtaccccgctttcttccggcagaagaaccgcagagagctgctcatc
ctcgccgtggccgtcgtgtccttcctcgtgggactcattatgctcacagagggtggaatg
tatgtcttccagctgtttgattactacgcagccagtgggatgtgtttgctattcgtagct
atttttgagaccgtctgcatcgcttggatatacggtgctaatcggttttatgacaatatt
gaggacatgattggttaccgtcctggcccgtatattaaatactgctggctcttcttcacc
ccagccacatgttttggtacgtttgcgttctccctgatcaaatacactcctctgaagtat
aataatgagtatgtgtacccgtggtggggttacgctctcggctggctgctggcgctctct
tctatggtttgcatcccgctgtgggttgtttctaaactgagcatggccaaaggttcactg
agagagcggatccacgagctcatcacgccctcaccagacctccccaaaaccagacgagag
caggagaaacttcaggccatctttgcagccgacggcgacactcttcgccagcgaggcggt
ccgaccaaagatgggtacttccccgtcagcgagaaggagtcgcactgttag
DBGET
integrated database retrieval system
